Pseudobacter ginsenosidimutans: FSB84_26470
Help
Entry
FSB84_26470 CDS
T06126
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
pgo
Pseudobacter ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgo02000
]
FSB84_26470
Transporters [BR:
pgo02000
]
Other transporters
Pores ion channels [TC:
1
]
FSB84_26470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
SHLD1_C
Motif
Other DBs
NCBI-ProteinID:
QEC45056
LinkDB
All DBs
Position
complement(6756326..6759574)
Genome browser
AA seq
1082 aa
AA seq
DB search
MRTAIILTCFFFLFATQAWSQNRPLTGTVMGQNKEPLSGATVELKGTNTRTSTNSKGQFR
ISVPSSGKSVLSISFIGFSTLEYGISSQTDITVSLLPEDSKQLEDVVVVNIGYGAVSKNA
VTGSVSSVTAKDIKDFPVATVAEALAGKLAGVSVVTSEGKPGADIQIRVRGGNSITQDNA
PLYIVDGIQVENALSVISPQEIQSIDVLKDVASTAVYGARGANGVVLITTKTGKTGKTMV
SLNSFAGARSIINKLDVLKPYDYVMYQYQLYNNNTDQQTKDAFAKSYGTWEDLDIYKNVP
FVEWQDRVFGRNAFSHTENLNITGGTDKSSFNFTMNNYKEDGIMLNSGAQRQFAAFRYDN
VASNKFKFGFNVRYSRQKVWGAGTANTGSQSNNRLRNAVRYRPFEAPGIADVVDEFDPDY
AKQTNLTGPVMDAYATERNDYTNQVITGVNGNYTVIKGLNIKTIFGITSTDRRMDQFNSA
ITGVARQNANMPVVDITTGATLTITNTNTISYDFKIKKQHAFTLLAGQELNQGRSKNTGV
NVKWLPVDITAEQAFAGIQKATPPSGALQEPPTTSISEQRLFSLFGRLSYSYAGRYMANF
IVRRDGSSLFPAHNRYATFPSAQVGWRISEEPLFQKLDIAWMNSLKFRASYGMGGNNRIG
VDLYKTLFAASSNNGYAIEEAVTPGFAPSYLANPDIKWETTVSRNLGLDIGLFKNRITAS
IDLYFNNTRDLLLTAQIPTTSGYTSQLQNIGETSNKGIELQLSAMIINKKDFTWSMNFNI
SHNRNRIESLGLDQYGNPKTSYAIASGGVNGQDFLAQVGSAVGQFYGYKADGWYTVDDFD
ITYNEGNKTWTYKLKPGIANSREVALGSKDPQPGDLKLKRLSGKPGDYVTEDDRTVLGNA
FPDFAGGFGNQFSWKNWDLNIFMNYSYGNETYNANRSEFTGQYLYKDNNMLAEVANRWKW
YDENGQKVTDPDKLRAMNANTSFWTPPGGQYILTDYAIEDGSFLRISNVTLGYSLPSRLL
QKWKVFSRFRIYATVNNLHTFTNYSGYDPEANTRRSNPLTPAVDYAAYPRSRYVLAGVEI
SF
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgagaacagccatcattctgacctgttttttctttctgtttgccacgcaggcatggtcg
cagaaccgaccgctcaccggaacggtcatgggacagaacaaggaaccactcagcggcgcc
accgttgagctcaaagggaccaatacccgcacttccaccaacagcaaaggccaattcagg
atctccgttccttcctcaggtaagtccgtgctcagcatcagctttatcggattcagcacc
ctggaatatgggatctccagtcaaacagatataaccgtatcactgctgccggaagattcc
aaacaactggaagatgtagtggttgtgaatatcggctacggagccgtctccaaaaatgca
gtaacaggatctgtttcttccgttactgcaaaagatatcaaggacttccctgtggctact
gtagccgaagccctggccggtaaactggcaggcgtatcggtggtcacttccgaaggaaag
cccggagcagatatccagatccgtgtgcggggtggcaactccattacacaggacaatgcg
ccactctatattgttgatggcatacaggtggaaaatgctctcagtgtgatttcaccacag
gagatccaaagtatcgatgtattgaaagatgtggcatcaactgccgtatacggcgcacgt
ggcgccaatggcgtggtgctgatcaccaccaaaaccggcaaaaccggaaaaacaatggta
agcctgaacagctttgccggcgcgcgatccattatcaataaactcgatgtactgaaacct
tacgattatgtaatgtaccagtaccagctctacaataacaatacagaccagcaaacgaag
gatgcattcgccaaaagttatggcacctgggaagacctggacatttacaaaaatgtgccc
tttgttgaatggcaggaccgcgtgttcggccgcaatgctttctcgcacaccgaaaatctc
aatatcaccggtggaacggataaatccagtttcaacttcaccatgaacaattataaggag
gatggtatcatgctgaattccggcgcacagcggcagtttgccgcgttccggtacgataat
gtggcttccaataaattcaaattcggtttcaatgtaaggtacagccgccagaaagtatgg
ggcgctggtaccgccaataccggctctcaaagtaataaccggctgcgcaatgccgttagg
taccgtccttttgaagccccgggcattgcagacgtggtggatgagttcgatccggattat
gccaaacagaccaatctcaccggccccgtgatggatgcatacgccaccgaaagaaatgat
tataccaaccaggtgatcaccggtgtgaacggaaattatactgtcatcaagggactgaac
atcaaaaccattttcggtatcaccagtacagaccggagaatggaccagttcaacagcgcc
atcaccggtgtggccaggcagaatgccaatatgcctgttgtggacatcactaccggcgct
acgctcaccatcaccaataccaataccatcagctacgatttcaaaataaaaaagcaacat
gctttcactttgctggcagggcaggagctgaaccagggcagatcgaagaatacaggagtg
aatgtaaaatggttgccggtagacatcactgctgaacaggctttcgcaggtatccagaaa
gcaacgccgccctcaggcgctttgcaggaaccacctaccacttccatttcagaacaaaga
cttttcagtttattcggccgcctgtcttattcctatgccggcaggtatatggccaacttc
attgtaagacgtgatggctcttctctcttcccggcgcataaccgttatgcaactttccct
tctgctcaagtggggtggcggatctcagaagaacccctctttcaaaaacttgatatcgcc
tggatgaacagcctgaagttcagggccagttatggcatgggtggcaataacaggatcggg
gtggatctctataaaactttgtttgctgccagcagcaacaatggctatgcaattgaagag
gccgttacgcccggctttgcgccatcttacctggccaatcccgatatcaaatgggaaaca
actgtgtcgcgcaacctgggactggatatcggtcttttcaagaaccgcatcactgccagc
atcgatctgtatttcaataatacgcgagacctgctgctcaccgcacagatacccactacc
agcggttatacatcacagttacagaacattggtgaaacttccaataagggcattgagctg
caattgagcgccatgatcatcaataaaaaagatttcacctggtccatgaacttcaatatc
tctcataacaggaacaggatcgaaagccttggccttgaccagtacggcaatcccaaaact
tcctatgcaattgcttccggtggtgtgaatggacaggatttcctggcacaggtaggctcc
gcagttggtcagttctatggctataaggcagacggatggtacactgtggatgatttcgat
atcacttacaatgaaggtaacaaaacctggacctataaattgaaacccggcatcgccaac
agcagggaagtggccctgggcagcaaggatcctcagcccggtgatctgaagctgaaaaga
ctctcaggcaagccaggcgattatgttacagaagacgacaggactgtactgggcaatgct
tttcctgattttgcaggcggtttcggtaaccagttctcctggaagaactgggacctgaat
atcttcatgaactattcatatggcaatgaaacctataatgccaacaggtctgaattcacc
ggacaatatctctacaaagacaataacatgctggcagaagtggccaaccgatggaaatgg
tatgatgagaacggacagaaagtaaccgatccggacaagctgagggccatgaatgccaat
accagtttctggacaccgcctggtggacaatacatcctcaccgactatgcgatagaagac
ggttcctttttgcgcatctccaatgtaacacttgggtattcccttccatcaagattattg
caaaaatggaaagtgttctcacggttcaggatatacgctactgtaaataacctccacact
ttcaccaattattccggttatgatccggaagccaataccaggaggagcaatccgctgacg
ccggcggtagactatgctgcttacccacgcagccgttatgtactggccggagtagaaatc
agtttttaa
DBGET
integrated database retrieval system
