Pseudobacter ginsenosidimutans: FSB84_27880
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Entry
FSB84_27880 CDS
T06126
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FSB84_27880 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgo03019
]
FSB84_27880 (groL)
03110 Chaperones and folding catalysts [BR:
pgo03110
]
FSB84_27880 (groL)
03029 Mitochondrial biogenesis [BR:
pgo03029
]
FSB84_27880 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgo04147
]
FSB84_27880 (groL)
Enzymes [BR:
pgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FSB84_27880 (groL)
Messenger RNA biogenesis [BR:
pgo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FSB84_27880 (groL)
Chaperones and folding catalysts [BR:
pgo03110
]
Heat shock proteins
HSP60 / Chaperonin
FSB84_27880 (groL)
Mitochondrial biogenesis [BR:
pgo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FSB84_27880 (groL)
Exosome [BR:
pgo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FSB84_27880 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FSB84_27880 (groL)
Exosomal proteins of breast cancer cells
FSB84_27880 (groL)
Exosomal proteins of colorectal cancer cells
FSB84_27880 (groL)
Exosomal proteins of bladder cancer cells
FSB84_27880 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
TetR_C_41
NNH2
Motif
Other DBs
NCBI-ProteinID:
QEC45327
LinkDB
All DBs
Position
complement(7157079..7158713)
Genome browser
AA seq
544 aa
AA seq
DB search
MAKQLFFDIEARNKMKKGVDTLANAVKVTLGPKGRNVVIEKKFGAPAVTKDGVSVAKEIE
LEDPIENMGAQMVKEVASKTADIAGDGTTTATVLAQAIISEGLKNVAAGANPMDLKRGID
KAVIKVIDNLRAQSQTVGTDSKKIQQVASISANNDDTIGKLIAEAFGKVGKEGVITVEEA
KNTETTVDVVEGMQFDRGYISPYFVTNSEKMEAELQSPYILIYDKKISAMKDILHILEKV
AQSGRPLVIIAEDLEGEALATLVVNKLRGTLKVAAVKAPGFGDRRKEMLQDIAILTKGIV
ISEEQGYKLENADLSYLGQAASITIDKDNTVVVGGKGKKDDINARVNQIKAQIEVTTSDY
DKEKLQERLAKLSGGVAVLYVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVAYI
RAIEALEKAKGANEDETTGIQIVKRALEEPIRQIVANSGIEGSIVVQKVKEGTKDYGFNA
RTEVYENLFKAGVIDPTKVTRIALENASSIAGMVLTTECVIADKPKKEEAHAHPGAPGMG
GMDY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcaactgttcttcgacatcgaagcacgtaataaaatgaagaaaggggtagat
accctggccaatgcagtgaaagtgacactgggtcccaaaggccgtaatgtggttatcgag
aaaaaattcggtgcacctgccgttactaaagacggtgttagtgttgccaaagaaatcgaa
ctggaagatcccatcgaaaatatgggcgctcaaatggtaaaagaagtagcttccaaaact
gctgacattgcaggtgatggtactaccactgctaccgttctggcacaagcgatcatcagc
gaaggtctgaagaacgtagccgccggcgctaacccaatggacctgaaacgcggtatcgac
aaagctgttatcaaagttatcgataacctccgcgcccagtctcaaaccgtaggtacagac
agcaagaagatccagcaagtggcttctatctctgccaacaacgacgacaccatcggcaaa
ctcatcgctgaagctttcggtaaagtaggcaaagaaggcgttatcactgttgaagaagca
aagaacactgaaactaccgttgacgtagtagaaggtatgcaattcgaccgtggctatatc
tctccttatttcgttaccaacagcgaaaagatggaagctgagctgcaaagcccttacatc
ctgatctacgacaagaagatcagcgctatgaaagatatcctccacatcctggagaaagtt
gctcaaagcggccgtcccctcgtgatcatcgcagaagacctcgaaggtgaagcactcgcc
acactcgtagtgaacaaactccgcggtaccctgaaagtggctgctgttaaagctcctggc
tttggcgaccgtcgtaaggaaatgctgcaggacattgcgatcctcaccaaaggtatcgtg
atctctgaagagcaaggatacaaactggagaatgctgacctgagctacctcggacaggct
gccagcatcactatcgacaaagacaacactgttgttgttggtggcaaaggcaaaaaagat
gatatcaatgcccgcgttaaccagatcaaagcacagatcgaagtaactacttccgattac
gataaagagaaattacaggagcgcctcgctaaactgagcggtggtgttgcagttctctat
gttggtgctgctacagaagttgaaatgaaagaaaagaaagaccgcgtagacgacgccctg
cacgcaacacgcgctgctgttgaagaaggtatcgttcccggtggtggtgtagcttatatc
cgtgctatcgaagcgctggaaaaagctaaaggcgccaacgaagacgagaccactggtatc
cagatcgtgaagagagcgctcgaagagcctatccgtcagatcgtggccaacagcggtatc
gaaggaagcatcgtggttcagaaagtgaaagaaggtacaaaggattacggtttcaacgcc
cgcaccgaggtttatgagaacctgttcaaagctggtgttatcgatcctaccaaagtaacc
cgtatcgctctcgagaacgcttcttctattgccggtatggtactcactactgagtgcgtg
attgccgacaagcctaagaaagaagaggctcatgctcatcctggtgctccaggcatgggt
ggaatggattattaa
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