Pseudobacter ginsenosidimutans: FSB84_29400
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Entry
FSB84_29400 CDS
T06126
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FSB84_29400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgo03021
]
FSB84_29400
Transcription machinery [BR:
pgo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FSB84_29400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_40
HTH_11
GBP_C
HTH_24
HTH_Tnp_ISL3
GerE
HTH_ParB
HTH_38
HTH_Mga
HTH_37
HTH_23
HTH_DeoR
DUF6502
HTH_9
Motif
Other DBs
NCBI-ProteinID:
QEC45604
LinkDB
All DBs
Position
complement(7502835..7503413)
Genome browser
AA seq
192 aa
AA seq
DB search
MPSYSEHTDPILIAAARQGDEQAFRLIYEKYHDDLFQMAFKRTRSKDDSSDIIQELFIAL
WNNLDNIHVTDNIGAYLYVALRHRIFNYYEKQSVRLHHILQQPLEPVSSEDLILAGIRAK
EIQACVAAAVLVMPEKMKTIYRLAKEQQLTMQEIATQLELSPQTIKNQLYLAMERIREQL
RRNDLARFIFLI
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
ttgccatcttattcagaacataccgaccctatacttattgctgccgcccgacagggcgat
gaacaggcattccgacttatctacgagaaataccacgacgatcttttccagatggcattc
aaaagaacccgtagcaaagatgattcctccgatatcatccaggaactttttatcgctctc
tggaataatctcgacaatatccatgtaaccgataatatcggcgcttatctctacgtggcc
ctgcggcacaggatcttcaactactatgagaaacaatctgtgaggttgcatcatattctt
cagcaaccactggaacctgtaagctcggaagacctgatccttgcaggcatcagggccaaa
gagatacaggcctgtgtggctgctgctgttctggtgatgccggaaaaaatgaaaaccatt
taccggctcgccaaagagcaacagcttactatgcaggagatcgctacacagctcgagtta
tcgccacagaccattaaaaaccagctctatctggctatggaacgtatccgggaacaactc
cggaggaatgatctcgctcgttttattttccttatttaa
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