Pseudobacter ginsenosidimutans: FSB84_29835
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Entry
FSB84_29835 CDS
T06126
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo00541
Biosynthesis of various nucleotide sugars
pgo01100
Metabolic pathways
pgo01250
Biosynthesis of nucleotide sugars
Module
pgo_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FSB84_29835 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pgo01005
]
FSB84_29835 (rfaD)
Enzymes [BR:
pgo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
FSB84_29835 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pgo01005
]
Core region
FSB84_29835 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
ThiF
Polysacc_synt_2
KR
NmrA
Motif
Other DBs
NCBI-ProteinID:
QEC45687
LinkDB
All DBs
Position
complement(7598088..7599083)
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AA seq
331 aa
AA seq
DB search
MDKNMSIVVTGAAGFIGSCLVGYLNEHGFNNLILVDDFSREDKTPNLDGKKWTSEVEREQ
FFDWLKEHKPGIDFIFHIGARTDTTEFDYSVHEHLNVEYSKKIWEYCTANNVPVVYASSA
ATYGNGEFGYDDDHELPYKLQPLNAYGISKNEFDKWALKETKQPPFWAGLKFFNVYGPNE
YHKGRMASVIFHSYKQIGSNGVVKLFKSHRPDFKDGQQLRDFVYVKDVINVCYWLMEQFY
AQHKVDNGLYNLGTGKARSFEDLVNATFAGIDRHSKIEYIDMPEDIRDKYQYFTEANMSK
LQKAGYSAPFYSLEDGVDDYVRNYLSAGEYY
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaatatgagtatcgtagttacaggcgctgccggtttcatcggcagctgcctt
gtaggctacctcaatgaacatggtttcaacaaccttatcctggtagatgatttttctagg
gaagacaaaactcccaacctggacggcaaaaaatggacttcagaagtggagcgtgaacag
ttcttcgactggctgaaagagcataaaccgggtattgatttcattttccatatcggcgcc
agaaccgataccaccgaattcgactactccgttcacgaacacctaaacgtagaatattcc
aaaaagatatgggaatactgcacggccaataatgttcctgtggtatatgcatcctctgct
gctacttatggcaatggtgaatttggatatgatgatgatcatgaactgccttacaagctg
cagccactcaatgcttacgggatctccaagaacgaattcgataaatgggcattgaaagaa
acgaagcagccgccgttctgggccgggctgaaattcttcaatgtgtacggtcctaatgaa
taccacaaaggccgcatggccagcgtgatcttccatagctacaaacagatcggtagcaat
ggcgtggtgaaactcttcaaaagccatcgtccggatttcaaggatggacagcaactacgt
gatttcgtatatgtgaaggatgtgatcaatgtttgttattggctgatggagcagttctat
gctcagcacaaagttgataatggactgtacaatctcggcaccggtaaggcaagatctttt
gaagacctggtgaatgccacatttgcgggcattgacaggcattcgaagattgagtatatt
gatatgccggaagatatccgcgataagtaccagtatttcacggaggccaatatgagcaag
ctccaaaaggccggctattcagcgcccttctattccctggaagatggggttgatgattac
gtgagaaattacctgagcgcaggggaatactattaa
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