KEGG   Parabacteroides goldsteinii: K6V26_04485
Entry
K6V26_04485       CDS       T07780                                 
Name
(GenBank) endonuclease VIII
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pgol  Parabacteroides goldsteinii
Pathway
pgol03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pgol00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    K6V26_04485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgol03400]
    K6V26_04485
Enzymes [BR:pgol01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     K6V26_04485
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     K6V26_04485
DNA repair and recombination proteins [BR:pgol03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     K6V26_04485
SSDB
Motif
Pfam: H2TH NFACT_N Fapy_DNA_glyco Zn_ribbon_TFIIB zf-FPG_IleRS
Other DBs
NCBI-ProteinID: UBD75611
LinkDB
Position
complement(867783..868616)
AA seq 277 aa
MIEAPEAQILSEQLNQTIKGKRISFVSAGYTPHKFVWYYGDPAGYSDKLLHKTVGEAHAY
GGLVEVEIEDVRLLFGDGMNICYYAPGKKLPEKHQLLIAFEDESCIMGSARMYGGIWCFP
ADSFECNFSPYRDGARSKPQVLSDAFNKTYFLSLINSEEKQKKTAKAFLATEQTIPGLGN
GVLQDILFKARIHPKTRISTLSDKQKDTLFHCVKDTLQDIYLAGGRNSETDLFGKKGGYI
PILSKDTVGKPCPVCGEDIRKENYLGGSIYYCFECQK
NT seq 834 nt   +upstreamnt  +downstreamnt
atgatagaagcaccggaagcccagatcctgtcggaacaattaaatcaaacgattaaagga
aagagaatctcttttgtcagtgccggatataccccgcataaatttgtctggtattatgga
gaccctgccggttacagtgacaagttactccataaaactgtcggagaagcacatgcttac
ggagggttggttgaagtggaaatcgaggatgtacggttacttttcggagacgggatgaat
atttgttattatgctcccggaaaaaaactgccggaaaaacatcagttactgattgccttc
gaggatgaaagttgtatcatgggttctgcccgaatgtacggcggaatctggtgtttcccc
gcagattcttttgaatgtaatttctccccctatcgtgatggggcacgaagcaaaccgcag
gtactttccgatgctttcaacaaaacctatttcctgagcctgataaacagcgaagaaaaa
caaaagaaaacagccaaagcatttctggccaccgaacaaacaatcccaggtctgggaaac
ggtgttttacaggatattctcttcaaggctcgtatccatcctaaaacacgcatcagcaca
ttatcggataaacagaaagacactttgtttcattgcgttaaagatacgcttcaggatatt
tatctagccggcggccgcaattctgaaaccgacctgttcggtaagaaaggaggttatatt
cccattttatctaaagataccgtcggaaaaccatgtccggtctgcggagaagatatacgg
aaggaaaattatttaggaggaagtatttattattgcttcgaatgtcagaaataa

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