Parabacteroides goldsteinii: K6V26_05675
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Entry
K6V26_05675 CDS
T07780
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
pgol
Parabacteroides goldsteinii
Pathway
pgol00541
Biosynthesis of various nucleotide sugars
pgol01100
Metabolic pathways
pgol01250
Biosynthesis of nucleotide sugars
Module
pgol_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pgol00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
K6V26_05675 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pgol01005
]
K6V26_05675 (kdsA)
Enzymes [BR:
pgol01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
K6V26_05675 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
pgol01005
]
Lipid A
K6V26_05675 (kdsA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
UBD75832
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Position
complement(1152873..1153676)
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AA seq
267 aa
AA seq
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MITVNDFKNKDNFFLMAGPCVIEGEDMALRIAEKVIGITEKLNIPYIFKGSYRKANRSRL
DSFTGIGDEKALKILRKVSETFNVPTVTDIHETHEAAMAAEYVDVLQIPAFLCRQTDLLV
AAAQTGKIVNIKKGQFLSPGAMQFAVQKVADAGNDNVMITERGTTFGYTDLVVDYRGIPQ
MQDFGYPVIMDVTHSLQQPNQTSGVTGGLPALIETIAKAAIAVGTDGLFIETHPEPSKAK
SDGANMLQLDLLEGLLTRLVRIREAIK
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgataacagttaacgattttaagaataaagataatttcttcctgatggcgggtccttgt
gtgatcgaaggggaagacatggcgctacgtatcgccgaaaaggttatcggcatcaccgag
aagctgaatattccatatatcttcaaaggttcataccgcaaggcaaaccgctcccgcctc
gattcatttaccgggatcggcgatgagaaagccttaaagattttacgcaaagtaagcgaa
acattcaacgtcccgaccgttacggatatacacgaaacccatgaagccgccatggctgcc
gaatatgtagatgtcctgcaaatcccggctttcctttgccgtcaaacggacctgcttgtc
gccgccgcacaaaccggaaagatcgtcaacatcaagaaaggacagttcctttctcccgga
gccatgcaattcgccgtacaaaaggttgccgatgcagggaatgacaacgtcatgatcacc
gagcggggaactacattcggttatacagacctggttgtcgattaccggggcatcccgcaa
atgcaggatttcggctatccggtcatcatggatgtaacccactcattacaacagcccaac
cagacatccggcgtaacaggcggtctgccggcattgatagaaacaatagccaaagccgct
attgctgtcggcaccgacggtctcttcatcgaaacccatccggaaccttccaaagcgaaa
tccgacggagccaatatgctacaattagatttgctcgaaggcttattgacacgtttagtc
cgcatccgtgaagcaatcaaataa
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