Parabacteroides goldsteinii: K6V26_06545
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Entry
K6V26_06545 CDS
T07780
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pgol
Parabacteroides goldsteinii
Pathway
pgol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6V26_06545 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgol03021
]
K6V26_06545 (rho)
03019 Messenger RNA biogenesis [BR:
pgol03019
]
K6V26_06545 (rho)
Transcription machinery [BR:
pgol03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
K6V26_06545 (rho)
Messenger RNA biogenesis [BR:
pgol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K6V26_06545 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA_22
Mor
OB_RNB
AAA
Motif
Other DBs
NCBI-ProteinID:
UBD75986
LinkDB
All DBs
Position
1349568..1351595
Genome browser
AA seq
675 aa
AA seq
DB search
MQKYNILELNEKLLPELQSIAEELGIKKISSLKKEELVYRILDEQAISYAGQQAEKEKEK
EAKKAEKQTKAKKPSKTAAAKAPKAESKPKAVKAEAAEVAAPKATQPVEEKQAAVVAEKK
EQPERKKRVRIEKKEKVAGAVAPANQTDEVKVSKTPQTVTTEVVVEKPLLPPVVVEGAPE
ELPVVETAPVAPASPAEPVVEKASEVPAAEAPAANEPKRVVFRHPDTKSVLDQLFPFSPS
PAKQEKAAPQQPEPQAAPQPQQQNTPRQNNNNRQNNQNNNHNNQRNNNNNNASQEKQYEF
DGILIGTGVLEMMQDGYGFLRSSDYNYLTSPDDIYVSQSQIKLFGLKTGDVVEGAIRPPK
EGEKYFPLVKVDKINGRSPEEVRDRVPFDHLTPLFPDEKFMLTARKAPKVYDNIAVRVVD
LFSPIGKGQRGLIVAQPKTGKTMLLKDIANAIAANHPEVYMIILLIDERPEEVTDMARSV
DAEVIASTFDEPAERHVKIAEIVLNKAKRMVECGHDVVILLDSITRLARAYNTVQPASGK
VLSGGVDANALQKPKRFFGAARNIENGGSLTILATALTETGSKMDDVIFEEFKGTGNMEL
QLDRKLSNKRIYPAVDITASSTRRDDLLQDESTLNRMWILRKYLSDMNSIEAMEFVKKRM
EQTYDNMEFLASMNG
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaatataacattctagaactaaatgaaaaactccttcctgaattgcagagtata
gcggaagagttgggaattaagaaaataagttctttgaaaaaagaagaacttgtttatcgc
attcttgatgaacaggctatctcatacgcaggtcaacaggcagaaaaggagaaagaaaaa
gaagctaagaaggctgaaaagcagacaaaagcaaagaaaccttctaaaacggctgctgca
aaagcgccgaaggctgaaagcaaaccgaaagctgtaaaagctgaagctgctgaggttgcc
gcccctaaagccacgcaacccgttgaagaaaagcaggcagctgtagttgcagaaaaaaag
gaacaacccgaacgtaagaaaagagtacgtattgaaaagaaggaaaaagtagctggtgca
gttgctccggctaatcagacggacgaagtgaaagtttcgaaaactcctcagactgtcaca
acggaagtggttgtagaaaagcctttattacctccggttgtagttgaaggcgctcccgaa
gagttgccggtagtcgaaacggctcccgtagctccggcgtcccccgcagaaccggtcgtt
gaaaaggcttcggaagtaccggcagcagaggctccggcagcgaacgaacctaaaagggtt
gtattcagacacccggacaccaagtcggttctcgaccaactcttcccgttctctccttca
cctgccaaacaggaaaaagctgcaccgcagcagcctgaaccgcaggccgctccgcaaccg
cagcaacagaacacgccccgtcagaataacaacaacagacagaacaaccagaataacaac
cacaataatcagcgcaacaataacaataataatgcatcgcaggaaaagcaatacgagttt
gacggtatcctgatcggtacaggcgtattggaaatgatgcaggatggttatggttttctg
cgttcttccgattataactatctgacctcaccggacgatatttatgtatcgcagtcgcag
atcaaactgttcggactgaagactggtgacgtggtggaaggtgctatccgtccgccgaag
gaaggtgaaaaatatttcccgctggtaaaagtggacaagatcaacggccgttcgccggaa
gaagtgcgcgaccgcgttcctttcgatcatctgacaccgcttttcccggatgaaaaattc
atgcttacagcacgcaaggctccgaaagtatacgacaatatcgctgttcgcgtagtcgac
ctgttctcgccgatcggtaaaggacagcgtggtctgatcgttgcacagcctaagaccggt
aaaaccatgttgctgaaagatatcgccaatgcgattgcagcaaaccatccggaagtctat
atgatcattctgttgatcgacgaacgtccggaggaagtaaccgatatggctcgtagtgtc
gatgcggaagtgatcgcttctactttcgatgaaccggcagaacgccacgtaaagattgcc
gaaatcgttttgaacaaggctaaacgtatggttgaatgcggtcacgatgtagtgatcctg
ttagattccattactcgtctggcacgtgcttataacacagttcagccggcttccggtaag
gttctttccggtggtgtggatgcgaacgcattacagaagccgaaacgtttctttggtgca
gcccgtaatatcgaaaacggcggtagcctgacgattctggcaacagcattgaccgagact
ggttctaagatggacgatgtgatttttgaagagttcaagggtaccggtaatatggaattg
cagttggatcgcaagttgtccaacaaacgtatttatccggctgtcgacattactgcttca
agtactcgtcgcgacgacctgttgcaggatgaaagtacattgaaccgtatgtggatcctt
cgtaaatatctgtcggatatgaactcgatcgaagcgatggagtttgtaaagaaacgtatg
gaacagacttatgacaatatggagttcctggcttccatgaacggataa
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