Parabacteroides goldsteinii: K6V26_10845
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Entry
K6V26_10845 CDS
T07780
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pgol
Parabacteroides goldsteinii
Pathway
pgol03410
Base excision repair
pgol03430
Mismatch repair
pgol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K6V26_10845 (recJ)
03430 Mismatch repair
K6V26_10845 (recJ)
03440 Homologous recombination
K6V26_10845 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgol03400
]
K6V26_10845 (recJ)
DNA repair and recombination proteins [BR:
pgol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
K6V26_10845 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K6V26_10845 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
K6V26_10845 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Toprim
Motif
Other DBs
NCBI-ProteinID:
UBD76774
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Position
2365778..2367502
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AA seq
574 aa
AA seq
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MINKWNFQTPTEEELHKRDALAAEIGFSPVICLLLVQRGITTAEEARKFFKPNLNDLHDP
FLMPDMDKAVKRLNRALGNKEKILVYGDYDVDGTTAVSLVYKYLRPYSSTLDYYIPDRYD
EGYGISYKGIDYASDNGVTLIISLDCGIKAIEKIEYAKTKGIDFIICDHHMPDDTLPDAV
AVLDAKRVDSIYPYEHLSGCGVGFKFMQAFAKSNNFPFSELEKLLELTAVSIASDIVPIT
GENRILAYYGLKQLNSNPSLGLKGIIDICGLTGKEITISDIVFKIGPRINASGRMMNGKE
AVDLLLAKDVESAREKSENINQYNDERRELDKKITDEANAIIDEFANMEDRKAIIVYNPG
WHKGVIGIVASRLTEKYYRPAVVLTKSSELITGSARSVTGFDIYKAIENCRDLLENFGGH
TYAAGLSLKEENLDEFTERFLKLAADEIIPEQMIPQIDIDAVLDLKDINTKFMSELKKMN
PFGPDNQKPVFCSLNVKDYGTSKLVGKELEHIKLELIDDKSNTPIHGIAFGMHQHSPHIK
GMKPFNICYTIEENTYNGNTTLQLMVKDIKVDDI
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgattaacaaatggaattttcaaaccccgacagaagaagaattacataagagagatgcg
ctggcagccgaaatcggtttcagcccggtcatctgtctcctgcttgttcagagagggatt
acgacggctgaagaagccagaaaattctttaaacccaatctgaacgatctgcatgacccg
ttcctgatgccggatatggataaggcggtgaaacgattgaacagagccttgggcaataaa
gaaaagattctggtttacggcgactacgatgtagacggcacgactgccgtatcgcttgtg
tataagtatttaagaccctattcatcgacgttggattattacattcccgaccgctatgac
gaagggtatggcatttcttataaagggattgattatgcctccgacaacggagtcacatta
attatttcgctcgactgcggaatcaaagcaatcgaaaagattgagtatgcaaagacaaaa
ggcattgactttattatctgcgaccatcacatgccggatgatacattgcccgatgccgtt
gcggtgttggatgctaaacgcgtagattccatctatccgtacgagcatctgtccggttgt
ggcgtaggcttcaaatttatgcaggcttttgccaaaagcaataactttcctttctccgaa
ctggagaaattactggaactgacggctgtcagcattgcttccgatatcgtgcctattacg
ggagaaaaccgtatcctggcttattacggactaaagcagttgaacagtaatcccagcctg
ggactgaaaggtatcatcgacatctgcggacttaccgggaaagagataaccatcagcgac
atcgttttcaagatcggtccgcgcatcaatgcttccggacggatgatgaacggaaaagaa
gcagtcgacctgttgctcgccaaagatgtagaatcagcccgcgagaagagtgaaaacatc
aaccaatacaatgacgaacgacgcgaactcgataaaaagataaccgacgaggcaaacgct
atcatcgatgaattcgccaatatggaagaccggaaagcaataatcgtttacaatcccggc
tggcataaaggagttatcggaatcgttgcgtcgcgactgacagagaaatattaccgtccg
gcagttgtgctgaccaaatcatccgaactgatcaccggttctgcccgctcggttaccggt
ttcgacatttataaggcaatagagaactgccgtgacttgctggaaaacttcgggggacat
acctatgccgccggcctttccctgaaagaagaaaatctggatgaatttaccgaacgtttc
ctgaagctggctgccgacgagattatccccgaacagatgatcccgcaaatcgacatcgac
gccgttctcgatctgaaggacatcaataccaagttcatgagcgaactgaaaaagatgaat
cctttcggtccggacaaccagaaaccggtattttgctcgctgaacgtgaaagattacggg
acaagcaagctggtcggcaaagaactggaacatatcaagctggaactgatagacgacaaa
tcgaacacgcccatccatggcatcgctttcggaatgcatcagcacagcccgcatattaaa
gggatgaaaccttttaatatctgctatacgattgaagagaatacatataacggaaacacg
accttgcaactcatggttaaagacataaaggtcgatgacatatga
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