Parabacteroides goldsteinii: K6V26_12190
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Entry
K6V26_12190 CDS
T07780
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pgol
Parabacteroides goldsteinii
Pathway
pgol03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K6V26_12190 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgol03400
]
K6V26_12190 (uvrA)
DNA repair and recombination proteins [BR:
pgol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K6V26_12190 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K6V26_12190 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
DnaJ_CXXCXGXG
AAA_21
AAA_14
RsgA_GTPase
nSTAND1
Viral_helicase1
AAA_22
AAA_18
ATPase_2
AAA_33
T2SSE
cobW
NACHT
NTPase_1
AAA_23
Motif
Other DBs
NCBI-ProteinID:
UBD77032
LinkDB
All DBs
Position
complement(2694062..2696902)
Genome browser
AA seq
946 aa
AA seq
DB search
MNDKNALEGGRISVLGARVHNLKNIDVEIPRNKLTVITGMSGSGKSSLAFDTIFAEGQRR
YVETFSAYARNFLGNMERPDVDKITGLSPVISIEQKTTNKNPRSTVGTTTEIYDFFRLLY
ARAGEAYSYLSGEKMVKYTEEQVLDLILEHYEGKKTYLLAPLVRNRKGHYKELFEQVRKK
GYLTVRVDGEIKEIFHGMKLDRYKMHSIEVVIDKMVVSASDERRLKESLRTAMKQGDGLV
MLLDADTDELRHYSRRLMDPATGLSYSEPAPHNFSFNSPQGACPKCKGLGQVNLLDMEKI
VPDPSLSIYNGGIVALGKYKNSLIFWQIEALCEKHGVTIKTPIKDIPAEAIDEIMNGTDE
RLQIKNESLGSSNYFLSYEGVAKYILMQQESEASASAQKWAGQFIKMTTCPECNGQRLNK
EALHYRIADKNIAEISSYDISELYDWLDGIEDRLDQKQKQIAIEILKEIRSRLKFLLDVG
LDYLSLNRASASLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNVRLINSLKEL
RDTGNSVVVVEHDKDMMLNADYVIDMGPKAGRLGGEVVYEGTPQEMLKVDTLTSAYLNGK
TEIAIPAERRKGNGKFISIKGAGGNNLKNVDVTFPLGTLICVTGVSGSGKSTLINRTLQP
ILSQHFYRSLEDPLPYKSIEGIDNVDKIVNVDQSPIGRSPRSNPATYTGVFSDIRNLFVD
LPESKVRGYKPGRFSFNVSGGRCETCKGNGYKTIEMNFLPDVLVPCEDCHGKRYNRETLE
VRFRGKSIADVLDMTINMAVEFFENIPTILSKIKVLQDVGLGYIKLGQPSTTLSGGESQR
VKLATELAKKDTGNTLYVLDEPTTGLHFEDIRVLLGVLNKLVEKGNTIIVIEHNLDVIKC
ADYLIDMGPEGGRKGGQVLFTGTPEEMVKKKTKSYTAPFLKEELKQ
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgaatgataagaatgcattggaaggcggacgtatttccgttttaggcgcccgcgttcac
aatttgaagaatatagacgtcgagataccgagaaacaaacttaccgtgataacgggtatg
agtggtagtggtaagtcatcactggcttttgatacgatttttgcggaaggacaacgccgg
tatgtggagacattctctgcctatgcccgtaacttcctcggaaatatggaacgtccggat
gtggataagatcaccggattgagcccggtcatctcgatcgaacagaaaacgaccaacaag
aatccccgttctactgtcggtacgacgacagagatctacgactttttccgtctgctttat
gcgagggcgggagaggcgtactcgtatctgagcggagagaagatggtgaaatacaccgaa
gagcaggtgctcgacctgattctggagcattatgagggaaagaagacatacctcctggct
ccgctggtccgcaatcgtaagggacattataaggaactgttcgagcaggttcgtaagaaa
ggctatctgaccgtccgtgtcgatggcgagatcaaggagatattccacggcatgaagctg
gaccgctacaagatgcacagcatcgaagtggtgatcgataaaatggttgtctcggcttcc
gacgaacgccgcctgaaagaaagcctgcgtacagccatgaagcagggtgacggactagtc
atgctgctggatgccgatacggacgagttgcgccattacagccgccgcctgatggacccg
gctaccggactttcctacagcgaaccggctccgcataatttttcctttaactccccgcaa
ggtgcatgccccaaatgtaaaggattgggacaggtgaacctgctggatatggaaaagatc
gtgccggatccttccctcagtatctataacggcgggatcgtggccctcgggaaatataag
aactcgcttatcttttggcagatagaagccctttgcgagaagcatggggtaacgatcaag
acgccgatcaaggatattccggcggaggcgatcgacgagatcatgaacggaaccgacgaa
cgacttcagatcaagaacgaatccctgggttcttccaattatttcctgtcttatgaaggc
gttgccaaatatatcctgatgcagcaggagagcgaggcgtccgcttccgcacagaaatgg
gcggggcagtttattaaaatgactacatgtccggaatgtaacggccagcgtctgaacaaa
gaggcattgcattaccggattgccgataagaatattgcggaaatatcttcttatgatata
tccgaactgtatgattggctggacggcatcgaagaccgtctggaccagaagcaaaagcag
attgccatagaaatattgaaggagatacgttcccgcctgaaattcctgctggatgtgggg
ctggattatctctctctcaaccgtgcttcggcaagcctttccggcggtgaaagccagcgt
atccgcctggcaacccagatcggcagccagctggtcaatgtgctttatatcctcgacgag
ccgagtatcgggttgcatcagcgtgataatgtccgtctgatcaactctttgaaagaactt
cgtgatacagggaactcggtcgttgtcgtggaacatgacaaggatatgatgctgaatgcc
gattacgtgatcgacatgggtccgaaagccggccgtctgggcggagaggtcgtgtacgaa
ggtacgcctcaggagatgctgaaggtcgatacgctgacgtccgcttatctgaacggaaaa
acagaaattgccattcctgccgaacgtcggaaaggaaacggcaagttcatctccatcaaa
ggagccggcggtaataacctgaaaaacgtagatgtgactttcccgctgggaacgctgatc
tgtgtgacaggcgtgtcggggagcggcaaatcgacgttgatcaaccgtaccctgcaaccg
atcctgagccagcatttctatcgttcgctggaagatccgttgccttataagtcgatcgaa
ggtattgataatgtggataagatcgtcaatgtcgaccagtcgcctatcggacgttcgccg
cgaagcaatccggctacctatacgggtgtgttttccgatatccgtaacctctttgtcgat
cttcccgaatcgaaagtaaggggatataaaccgggacgcttctcattcaacgtgtccggc
ggtcgttgcgaaacctgcaaagggaatggttacaagaccatcgagatgaactttctgccc
gacgtattggtgccctgcgaggactgtcatggcaaacgttacaaccgcgaaacactggaa
gtgcgtttccgcggtaaatccattgcggatgtactggatatgacgatcaacatggcggtg
gagttctttgagaatatcccgaccatcttgtctaagatcaaggtcttgcaggatgtgggc
ctgggttatattaaactggggcaaccttccaccacgttgtccggcggcgaaagccaacgt
gtgaagctggcaactgaactggctaaaaaggatacaggcaatacattatatgtactggac
gaaccgacaaccggtcttcatttcgaagacatccgtgttcttctgggtgtcctgaacaag
ctggtggaaaagggcaacaccatcatcgtcatcgagcataacctcgacgtcatcaaatgc
gccgactacctgatcgacatgggccccgaaggcggccgtaaaggcggtcaggtcttgttt
accggcaccccggaagagatggtaaagaagaaaacgaagagctataccgctccgttcctg
aaagaggagttgaaacaataa
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