Parabacteroides goldsteinii: K6V26_13035
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Entry
K6V26_13035 CDS
T07780
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pgol
Parabacteroides goldsteinii
Pathway
pgol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6V26_13035 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgol03019
]
K6V26_13035 (recQ)
03400 DNA repair and recombination proteins [BR:
pgol03400
]
K6V26_13035 (recQ)
Enzymes [BR:
pgol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K6V26_13035 (recQ)
Messenger RNA biogenesis [BR:
pgol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K6V26_13035 (recQ)
DNA repair and recombination proteins [BR:
pgol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K6V26_13035 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
UBD77733
LinkDB
All DBs
Position
2934757..2936589
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AA seq
610 aa
AA seq
DB search
MKELQLLLKKFFGYTSFRPLQAEIIQRILRKEDSLVLMPTGGGKSICFQLPAIYMPGTAV
VISPLIALMKDQVGGLVANGIPAAALNSMMPEEERHRIKQLCIQGKIKLLYLSPEALVGE
LHWLLPRMDISLIAIDEAHCISHWGHDFRPEYTQLSVLKEQFPKVPIVALTATADKVTRT
DIVTQLKLRDPEVFVSSFDRPNLSLTIRRGLNKKEKTSAIVHFIHAHRHQSGIVYCMSRN
STENLAEELSSYGIKAVAYHAGLPPVQREKAQDDFINDRVNVVCATVAFGMGIDKSNVRW
VVHYNMPGSIENYYQEIGRAGRDGMKSDTLLFYSVGDLLVLRRFAEESGQRDTNLQKLNR
MRRYCEADICRRRILLSYFGEESDQDCGNCDVCKNPPQRFDGSILVQKALSAIFRTGEFV
GMNMLINILRGSEKTEITEKGYDKLKTYGAGKDLSYKEWKEYLYQMLQLGYIEIDYVNAG
ILKVTPLGRKVLFGEQKAMMAIYKEPEEKTYFRRKDSKFKYRPIKPIQSASVEETLLDSL
QQLRKQIAEREQTPAYIIFSDDSLEDMVQKRPVTLEEFSEIRGVGEIKLEKYGKVFVALI
RFVLRLPKDR
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagttacagttgctgctaaagaagtttttcggatatacttctttccgtccgtta
caggcggagatcatacaacgtattttgaggaaagaggattcactggtgctgatgcctacc
gggggaggaaaatcaatttgtttccagttaccggccatttatatgccgggaacagctgtc
gtgatctctcccttgatcgccctgatgaaagaccaggtaggcggattggttgccaacggt
atcccggcagccgcactcaacagcatgatgccggaagaagaacgacacagaataaaacaa
ctctgcatccagggtaaaataaaactgctttacctgtcacccgaagccctggttggcgaa
ctgcattggctgcttccccgtatggacatatccctgatcgccatcgacgaagcccattgt
atctcacattgggggcacgacttccgtcccgaatatacccaactgtccgttttgaaagaa
cagttccccaaagttccgatcgtcgccctgacagctacagccgacaaagtcacacgtacc
gacattgtcacccaattgaagctgcgtgatccggaagttttcgtttcgtccttcgaccgt
ccgaacctgtccctgactatccgccggggactgaacaaaaaggagaaaacttccgccatc
gtccatttcatccatgcccaccgccatcagagcggtatcgtttactgcatgagccggaac
agtaccgagaacctggcagaagaactctcttcttacgggatcaaggccgttgcctatcat
gccggactcccgcccgttcaacgcgaaaaggcacaggatgattttatcaacgaccgggta
aacgtggtctgtgcaaccgttgccttcgggatgggaatagataaaagcaatgtgcgttgg
gtcgtacattataatatgcccggaagtatcgagaactactaccaggaaataggccgtgcc
ggacgcgacggaatgaaaagcgacactttactgttctattcggtaggcgacctgctcgtc
ctccgccgttttgccgaagagagcggacaaagagacaccaacctccagaagctgaaccgt
atgcgccgttattgcgaagcggacatctgccgccggcgtatcctcctcagctacttcgga
gaagaaagcgaccaagattgcggcaactgtgatgtatgcaaaaaccctccgcaacggttc
gacggcagcatactcgtccaaaaagcgttaagcgccatcttccgtaccggtgaatttgtc
ggcatgaatatgctgatcaatatcctccgcggctcggagaagacagagatcacggaaaaa
ggatacgataaattaaagacatacggtgccggaaaagacctctcctataaagaatggaaa
gaatatctttaccagatgcttcaattgggatatatcgaaatcgattatgtcaatgccgga
atactgaaagtcactccgctgggaagaaaagtattgttcggtgaacagaaagcgatgatg
gctatctataaagagccggaagaaaaaacttatttcagaagaaaagactcgaaattcaaa
taccgccccatcaaacccatccaatcggcatcggtcgaagaaacgctgctcgactcgctc
cagcaactccgcaagcagattgccgaacgcgaacagacaccagcctacatcatcttttct
gatgactcactggaagatatggtacaaaaaaggcctgttaccctggaagagttcagcgaa
atacgcggtgtgggagaaatcaaactggaaaaatacggaaaggtattcgtggcactgata
cggttcgtactacggttgcccaaagacagataa
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