Parabacteroides goldsteinii: K6V26_15050
Help
Entry
K6V26_15050 CDS
T07780
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
pgol
Parabacteroides goldsteinii
Pathway
pgol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6V26_15050 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgol03019
]
K6V26_15050 (rny)
Messenger RNA biogenesis [BR:
pgol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K6V26_15050 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
Cas3_HD
Endopep_inhib
KH_NusA_2nd
DUF641
Motif
Other DBs
NCBI-ProteinID:
UBD77566
LinkDB
All DBs
Position
complement(3386659..3388197)
Genome browser
AA seq
512 aa
AA seq
DB search
MTVYIIISSIVALLIGGLLTWLSMRFLLKSRYDSVLREAEKEAEVIKKNKLLEVKEKFLH
LKADLEKQVSARNAKIQSAEGKLKQRELTLNQRQEDLQRKNCEIDAVKENLATQLELVDR
RKQDLEKLHQREIEQLEALSGLSADEAKERLIESLKDEAKSEATSYINEIMEEAKMTANK
EAKKIVIQSIQRVATETAIENSITVFHIESDEIKGRIIGREGRNIRALEAATGIEIVVDD
TPEAIVLSGFDPVRREIARLALHQLVQDGRIHPARIEEVVTKVKKQVEDEVVETGKRTVI
DLGVHGLHPELIRMIGKMKYRSSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLLH
DIGKVPDDEPELPHAILGMKLCEKYKEKPDICNAVGAHHDEVEMQTLLAPIVQVCDAISG
ARPGARREIVEAYIKRLNDLEQLALSYPGVVKTYAIQAGRELRVIVGADKIDDKDTENLS
NEIAKKIQDEMTYPGQVKITVIRETRAVSYAK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgtatataatcatatcatcaattgtagctctcctgataggagggttgttgacg
tggttgagcatgcgttttcttctgaagtcgaggtacgattccgtactgagggaagccgag
aaggaagcggaagtgatcaagaaaaacaaattgctggaagtaaaggaaaaattccttcat
ctgaaagcggatctggaaaaacaagtatcggcaaggaacgcaaagatccagtcggccgaa
ggaaagttgaaacaacgtgaactgacactcaaccagcgtcaggaagatttgcagcgtaaa
aactgcgagattgatgcggtgaaagaaaatctggctactcaattggaattggtagataga
agaaaacaggatctggaaaaacttcatcaacgggagatcgagcagctggaagccctttcc
ggactttctgccgatgaagctaaagaacgcctgatcgaatcgttgaaagacgaagccaaa
tcggaagcaacttcttatatcaatgagatcatggaagaagcgaagatgacggctaataaa
gaagcaaagaagatcgttatccagtctatccagcgtgtagcgactgaaacggcgatcgaa
aactccattaccgtattccatatcgaatcggatgagatcaaaggacgtatcatcggtcgt
gaaggccgtaacatccgtgccctggaagcagctaccggtattgagatcgttgtcgacgat
acccccgaagcgatcgttctttccggctttgacccggttcgccgtgagattgcccgtttg
gcattgcaccagttggtacaggacggacgtatccatccggcccgtatcgaagaggtggtg
acgaaagttaaaaaacaggtggaagacgaagtggttgaaaccggtaaacgtacggtgatc
gacctgggggttcatggattgcatcccgaactgatccgtatgatcggtaagatgaaatat
cgttcttcttatggtcagaacctgttgcagcatgcccgtgaaacggccaatctttgtgcc
gtgatggcttccgaattaggattgaacccgaagaaagcgaaacgtgcaggtttgttacat
gatattggtaaggtgcctgatgatgaaccggaattgccgcacgcaatcctgggtatgaag
ctttgcgagaaatataaggaaaaaccggatatctgtaatgcagtaggtgcccaccacgat
gaggttgagatgcagacattgctggcaccgatcgttcaggtttgtgacgctatctccgga
gctcgtccgggtgcccgtcgtgaaatcgttgaggcttatatcaaacgtttgaacgatctg
gaacaattggctctttcttatccgggtgttgtgaagacttatgctatccaggcaggccgc
gaacttcgcgttattgttggggcagataagatcgacgacaaggatacggaaaacctgtca
aacgaaatcgcaaagaagatacaggatgaaatgacttatccggggcaggtaaaaatcacg
gttatccgcgaaacccgtgctgtaagttatgcgaaataa
DBGET
integrated database retrieval system
