Paraburkholderia graminis: CUJ91_00020
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Entry
CUJ91_00020 CDS
T05548
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pgp
Paraburkholderia graminis
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgp03032
]
CUJ91_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
pgp03400
]
CUJ91_00020 (gyrB)
Enzymes [BR:
pgp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CUJ91_00020 (gyrB)
DNA replication proteins [BR:
pgp03032
]
Prokaryotic type
DNA Topoisomerases
CUJ91_00020 (gyrB)
DNA repair and recombination proteins [BR:
pgp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CUJ91_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AXF06464
LinkDB
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Position
PHS1_A:3083..5554
Genome browser
AA seq
823 aa
AA seq
DB search
MTETNNTQPDNSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEAL
AGYCNDIQVIIHADNSISITDNGRGVPTGLKMDDKHEPKRSAAEIVMTELHAGGKFDQNS
YKVSGGLHGVGVSCVNALSAWLRLTIRRDGKKHFMEFHRGVPQNRVIEEIDGVAVSPIQV
VGDTENRGTEVHFMADETIFGNVEYHYDILAKRIRELSFLNNGVRIRLTDQRTGKEDDFA
FVGGVKGFVEYINKTKSVLHPTIFHVSGEKDGVGVEVAMQWNDSYNENVLCFTNNIPQRD
GGTHLTGLRAAMTRVLNKYIADHEVAKKAKVETSGDDMREGLSCVLSVKVPEPKFSAQTK
DKLVSSEVRAPVEDVVAKALEEFLLETPNDAKIICGKIVDAARARDAARKAREMTRRKGV
LDGVGLPGKLADCQEKDPAKSEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKAR
YDKLLSSEQIVTLITALGCGIGKEDYNLDKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQ
MPEMIERGYIYIAQPPLFKIKAGKDERYLKDESEVNAHILKLALQGSELLASENATPITG
DALGELARAYLLAQAVVNRLSRLYDAGALEAVMDGVVIDLSSEAAAETSAKALEAKLRDD
ALKPEVRVTTMYDPVRELRSLKVARTHHGNQKISVFDEEFQLTADYQQLVNTANTFKGLI
GAGAVIKRGERSMAVTDFKSAMKWLLADAERNISKQRYKGLGEMNPGQLWETTMDPTVRR
LLRVQIEDAIAADGIFTTLMGDDVEPRRAFIESNALRAGNIDV
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaacgaacaatacgcaacccgacaacagctacggcgcctcgtccattcagatc
ctcgaaggtctggaggcggtgcgcaagcggccggggatgtacatcggggatacatcggat
ggcaccggtttgcaccacctcgtgttcgaagtgctcgacaactcgatcgacgaagcgttg
gccggctattgcaacgacatccaggtgatcattcacgcggacaactccatctcgatcacc
gacaacggccgcggcgtgccgaccggtctcaagatggacgacaagcacgagccgaagcgc
agcgccgccgaaatcgtgatgaccgagttgcacgcgggcggcaagttcgaccagaacagc
tacaaggtgtcgggcggcttgcacggcgtcggcgtgtcgtgcgtgaatgcgctgtcggcg
tggctgcgtttgacgattcgccgcgacggcaaaaagcacttcatggaattccaccgtggc
gtgccgcagaatcgcgtgatcgaagagatcgacggcgtggccgtgtcgccgattcaagtg
gtgggcgataccgaaaaccgcggcaccgaagtgcatttcatggccgacgagacgatcttc
ggcaacgtcgaatatcactacgacattctggccaagcgcatccgcgaactgtcgttcctg
aataacggcgtgcggattcgtttgaccgatcagcgtacgggcaaagaggatgatttcgcg
tttgtcggcggcgtgaagggttttgtcgagtacatcaacaagaccaagagtgtcttgcat
ccgaccattttccacgtgagcggcgagaaagacggcgtgggcgtggaagtggcgatgcag
tggaacgacagctacaacgaaaacgtgctgtgcttcacgaacaacattccgcagcgcgac
ggcggcacgcacttgaccggcctgcgcgcggccatgacgcgtgtgctgaacaagtacatc
gccgatcatgaagtcgcgaagaaggcgaaggtcgagacgtccggcgacgacatgcgagaa
gggctttcatgcgtgttgtcggtgaaggtgccggagcctaagttcagcgcgcagacgaag
gacaagctggtgtcgtcggaagtgcgcgcgcccgtggaagacgtggtcgcgaaggcgctc
gaggaattcctgctggaaacgccgaatgacgcgaagatcatctgcggcaagatcgtcgac
gccgcgcgcgctcgtgacgccgctcgcaaggcgcgtgagatgacgcgccgcaagggcgtg
ctcgatggcgtcggtttgccgggcaagctcgcggattgccaggagaaggacccggcgaag
tcggagatttatatcgtcgagggcgactcggcaggcggctcggcgaagcagggacgcgac
cgcaagttccaggcaatcttgccgctgcgcggcaaggtgctgaacgtggagaaggcgcgt
tatgacaagctgctttcttcggagcagatcgtgacgctgatcacggcgctcggctgcggt
atcggcaaggaagactacaacctcgataagctgcgttatcaccgcatcatcatcatgacc
gatgctgacgtggacggcgcgcacatccgcacgctgctgctgacgttcttctatcggcag
atgccggagatgatcgagcgcgggtatatctacatcgcgcagccgccgttgttcaagatc
aaggcgggcaaggacgagcggtatctgaaggacgagagcgaggttaatgctcacatcctc
aagctcgcgttgcagggttccgaactgttggcttctgagaatgcaacgccgattaccggc
gatgcgttgggcgaattggctcgggcttatttgctggcgcaggcggtggtgaaccggttg
agccgcttgtatgacgcgggcgcgctagaggctgtgatggacggggtcgttattgatctt
tccagcgaggcggccgctgagacatcggcaaaagcgcttgaggctaagcttcgcgatgat
gctctgaagcccgaggttagggttacgaccatgtatgacccggtgcgtgaattgcgctcg
ctgaaggtcgcgcggacgcatcacggcaatcagaaaatctccgtgttcgatgaagagttt
caattgactgccgactatcagcagttggtgaacaccgcgaatacgtttaaggggttgatt
ggcgctggcgccgttatcaagcgcggtgagcggagtatggctgttactgacttcaagtct
gcgatgaagtggttgctggctgatgccgaacgcaatatctcgaagcaacgctataagggg
ctcggtgagatgaaccccgggcagctttgggagactacgatggacccgaccgtgcgtcgt
cttcttcgtgtgcagattgaggatgctatcgcggctgatggcattttcacgacgctgatg
ggggatgatgttgagccgcggcgggctttcattgagtcgaatgcattgagggcggggaat
attgatgtttga
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