Paraburkholderia graminis: CUJ91_00810
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Entry
CUJ91_00810 CDS
T05548
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pgp
Paraburkholderia graminis
Pathway
pgp00300
Lysine biosynthesis
pgp00470
D-Amino acid metabolism
pgp01100
Metabolic pathways
pgp01110
Biosynthesis of secondary metabolites
pgp01120
Microbial metabolism in diverse environments
pgp01230
Biosynthesis of amino acids
Module
pgp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CUJ91_00810
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CUJ91_00810
Enzymes [BR:
pgp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CUJ91_00810
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
TAL_effector
CitF
Motif
Other DBs
NCBI-ProteinID:
AXF06592
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Position
PHS1_A:complement(189727..190590)
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AA seq
287 aa
AA seq
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MKLKFTKMHGAGNDFVVLDGYTQALNLTPEQVRALADRHFGVGADQLLLVEKPTVDGVDF
RYRIFNCDGGEVEHCGNGARCFVKFVRDSGLTDQRSVRVQVQNGTITLTMQENGEVLVDM
GSPVFEPERVPFATKGLQGRREGADTLWPLDVNGTTRWISVVSMGNPHAVQVVDDVEAFP
VLVEGPVIERHARFPQKVNAGFMQIVGRSEIKLRVYERGAGETLACGTGACAAVAAGIRR
GLLDAPVLVHTHGGKLTISWDSNKESEPLLMAGPATTVFQGEIELAD
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaattcaccaagatgcacggcgcgggtaacgacttcgtcgtgctcgacggc
tacacgcaagcgctcaacctgacgccggagcaggtgcgcgcgctcgccgaccgccatttc
ggcgtcggcgccgaccagttgctgctggtcgaaaagcctaccgtggatggcgtcgatttc
aggtatcgcatcttcaattgcgacggcggcgaagtcgagcattgcggcaacggcgcgcgc
tgcttcgtgaagttcgtgcgcgacagcgggctgaccgatcagcgcagcgtgcgcgtgcaa
gtgcagaacggcaccatcacgctgaccatgcaggaaaacggcgaggtgctcgtcgacatg
ggctcgccggtgttcgaaccggaacgtgtgcctttcgccaccaaaggtctccagggacgt
cgcgaaggcgcggatacgctctggccgctcgacgtgaacggcacgacgcgctggatttcg
gtcgtgtcgatgggcaatccgcacgccgtgcaagtggtcgacgacgtcgaggcgtttccg
gtgctcgtcgaaggtccggtgatcgagcggcacgcgcgctttccgcaaaaggtgaacgcg
ggcttcatgcagatcgtcggccggagcgaaatcaagctgcgcgtctatgagcgcggcgcc
ggcgaaacgctggcgtgcggcacgggcgcatgcgcggcggtggccgcgggcattcggcgc
ggactgctcgacgcgccggtgctcgttcacacgcacggcggcaagctcaccatttcgtgg
gacagtaataaggaaagcgaaccgctgctgatggcgggtccggccacgaccgttttccag
ggcgagatcgaactggccgactga
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