Paraburkholderia graminis: CUJ91_03370
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Entry
CUJ91_03370 CDS
T05548
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pgp
Paraburkholderia graminis
Pathway
pgp00521
Streptomycin biosynthesis
pgp00523
Polyketide sugar unit biosynthesis
pgp00525
Acarbose and validamycin biosynthesis
pgp00541
Biosynthesis of various nucleotide sugars
pgp01100
Metabolic pathways
pgp01110
Biosynthesis of secondary metabolites
pgp01250
Biosynthesis of nucleotide sugars
Module
pgp_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CUJ91_03370 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CUJ91_03370 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CUJ91_03370 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CUJ91_03370 (rfbB)
00525 Acarbose and validamycin biosynthesis
CUJ91_03370 (rfbB)
Enzymes [BR:
pgp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CUJ91_03370 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
AXF07051
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Position
PHS1_A:759780..760841
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AA seq
353 aa
AA seq
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MILVTGGAGFIGANFVLDWLNTSDEAVLNVDKLTYAGNLGTLKSQQGNPQHVFVRADICD
RAAMDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARSYWNTLDEA
AKAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPV
LTTNCSNNYGPYQFPEKLIPLMIANALGGKPLPVYGDGQNVRDWLYVGDHCSAIREVLAR
GVPGETYNVGGWNEKKNLEVVHTLCDLLDTLRPKTAGSYRDQITYVKDRPGHDRRYAIDA
RKLERELGWKPAETFETGLAKTVQWYLDNQAWSDEVASGEYRKWVETNYAQRA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgatcctggttacgggcggtgccggctttatcggcgccaatttcgtgctcgactggctg
aatacgtcggacgaagcggtgctgaacgtcgataagctgacctatgccggcaatctcggc
acgctcaagtcgcaacaaggcaatccgcagcacgtcttcgtgcgcgcggacatttgcgac
cgcgccgccatggacgcgctcttcgccgaacacaagccgcgcgcggtgctgcactttgcc
gcggaaagccatgttgaccgctcgatccacggcccggccgatttcgtgcaaaccaacgtt
gtcggtacgttcacgctgctcgaagccgcgcgaagctactggaacacgctggacgaagcc
gcgaaggcagcgttccgcttcctgcacgtctcgaccgacgaagtcttcggctcgctgtcc
gcgaccgatccgcagttctccgaaaccacgccgtacgcgcccaatagcccgtattcggcg
accaaggcgggctcggaccatctggtgcgcgcgtaccatcacacgtacggcctgccggtg
ctcaccacgaactgctcgaacaactacggcccgtaccagttccccgaaaagctgattccg
ttgatgatcgccaacgcgctcggcggcaagccgctgccggtatacggcgacggtcagaac
gtgcgcgactggctgtatgtcggcgaccattgcagcgcgattcgcgaagtgctcgcgcgc
ggcgtgccgggcgaaacgtacaacgtcggcggctggaacgagaagaagaacctcgaggtc
gtgcacacgctgtgcgatctgctcgacacgctccgtccgaaaacggccggttcgtaccgc
gaccagatcacttacgtgaaggaccgtccgggccacgatcgccgttacgcaatcgacgcc
cgcaagctcgagcgcgaactcggctggaagcctgcggagacattcgaaacgggtctggca
aaaactgttcagtggtatctcgacaatcaggcatggtctgacgaagtcgcttcgggcgag
taccgcaagtgggttgagaccaactacgcgcaacgcgcgtaa
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