Paraburkholderia graminis: CUJ91_05850
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Entry
CUJ91_05850 CDS
T05548
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pgp
Paraburkholderia graminis
Pathway
pgp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CUJ91_05850 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgp03019
]
CUJ91_05850 (pnp)
03016 Transfer RNA biogenesis [BR:
pgp03016
]
CUJ91_05850 (pnp)
Enzymes [BR:
pgp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CUJ91_05850 (pnp)
Messenger RNA biogenesis [BR:
pgp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CUJ91_05850 (pnp)
Transfer RNA biogenesis [BR:
pgp03016
]
Prokaryotic type
tRNA degradation factors
CUJ91_05850 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_KhpA-B
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
AXF07502
LinkDB
All DBs
Position
PHS1_A:1293018..1295159
Genome browser
AA seq
713 aa
AA seq
DB search
MFSKIVKEFKWGQHNVRLETGEIARQASGAVIVDVEDTVILATVVGARTAKPGQDFFPLT
VDYLEKTYAAGKIPGGFFRREGRPSEGETLISRLIDRPLRPLFPEGFYNEVQVVIHVLSL
NPDVPADIPALIGASAALAVSGLPFNGPVGAARVAYINNEYVLNPTRPQMKESALDLIVA
GTERAVLMVESEAQQLSEEVMLGGVVFGHEQMQIAIDAIHDLVREGGKPEWDWQPAAKNE
PLIARVTELAQAELLAAYQIRDKQARSSKLKEVYAAVSAKLEEEAAASGTVAADKATVGN
VLFDIEAKIVRTQILNGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVVAT
LGTKGDEQNIDALEGEYRERFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALAACL
PSADEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGNKF
AVLTDILGDEDHLGDMDFKVAGTEQGVTALQMDIKIQGITKEIMQVALAQAKEGRMHILG
KMTSAVSGANTQLSEFAPRMITIKINPEKIRDVIGKGGSVIRALTEETGTTIDISDDGVV
TIASTSSEGMAEAKKRIENITLEVEVGQVYEGTVLKLLDFGAIVNILPGKDGLLHISEIA
NERIKDINDYLKDGQQVKVKVIQTDEKGRVRLSAKALLNDGASSAPQGEPTPQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagatcgtcaaagaatttaagtggggacaacataacgttcgcctggaaacc
ggcgaaatcgctcgccaggcgagcggcgcggtgatcgtcgacgtcgaagacaccgttatc
ctggcgaccgtggtcggcgccaggaccgccaagccgggccaggacttcttcccgctgacc
gtcgactatctcgagaagacttacgccgccggcaagattccgggcggtttcttccgccgc
gaaggccgtccgtcggaaggcgaaacgctgatctcgcgcctgatcgaccgtccgctgcgt
ccgctgttcccggaaggcttctacaacgaagtgcaggtcgtgattcacgtcctgtcgctg
aatccggacgttcccgctgacattcccgcgctgatcggcgcgtcggcggcactcgccgtg
tccggtctgccgtttaacggcccggtcggcgcagcgcgcgtggcttacatcaacaacgaa
tacgtgctgaacccgacgcgtccgcaaatgaaggaatcggcgctcgacctgatcgtcgcc
ggtacggaacgcgcggtgctgatggtggaatccgaagcgcagcaactgagcgaagaggtg
atgctcggcggtgtggtgttcggccacgagcaaatgcagatcgcgatcgacgcgatccac
gatctggtccgtgaaggcggcaagccggaatgggattggcagccggccgcgaagaacgag
ccgctgatcgcacgcgtgacggaactggcgcaagccgaactgctcgcggcttaccagatt
cgcgacaagcaggcacgttcgagcaagctgaaggaagtctacgcagcggtttcggcgaag
ctggaagaagaagccgcggcaagcggcaccgtggcggccgacaaggcaacggtcggcaat
gtgctgttcgacatcgaagcgaagatcgtccgtacgcagatcctgaacggcgaaccgcgt
atcgacggccgcgacacgcgcaccgtgcgcccgatcgaaatccgtaccggcgtgctgccg
cgtacccacggttcggcgctgttcacgcgcggcgaaacgcaggcgctggtggtggccacg
ctcggcacgaagggcgacgagcagaacatcgatgcactcgaaggcgagtaccgcgagcgc
ttcatgctccactacaacatgccgccgttcgcgaccggcgaaacgggccgcgtcggttcg
ccgaagcgccgtgaaatcggtcacggccgtctcgccaagcgcgcgctggccgcctgcctg
ccgagcgccgacgaattcggctactcgattcgcgtcgtgtcggaaatcacggaatcgaac
ggttcgtcgtcaatggcttcagtgtgcggcggctgcctcgcgctgatggacgccggcgtg
ccgatgaaggcgcacgtcgccggcatcgcgatgggcctgattctcgaaggcaacaagttt
gccgtgctgaccgacattctcggcgacgaagatcacctcggcgacatggacttcaaggtg
gcgggcacggaacaaggcgtgaccgcgctgcagatggacatcaagatccagggcatcacg
aaggaaatcatgcaggtcgctctcgcgcaagcgaaggaaggccgcatgcatattctcggc
aagatgacgtcggccgtgtcgggtgctaacacgcaactgtccgagttcgcgccgcgcatg
atcaccatcaagatcaatccggaaaagatccgcgacgtgatcggcaagggcggttcggtg
atccgcgcgctgacggaagaaaccggcacgacgatcgatatttccgacgacggcgtcgtg
accatcgccagcaccagcagcgaaggcatggccgaagcgaagaagcgtatcgagaacatc
acgctcgaagtcgaagtgggccaggtgtacgaaggcacggtgctgaagctgctggatttc
ggcgcgattgtgaacattctgccgggcaaggacggtctgttgcatatctccgagatcgcg
aacgagcgcatcaaggacatcaacgactacctgaaggacggccagcaagtgaaggtcaag
gtcatccagacggacgagaagggtcgtgtgcgtttgtcggcgaaggcgttgctgaacgac
ggcgcgtcgagcgcgccgcaaggcgaaccgacgccgcagtaa
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