Paraburkholderia graminis: CUJ91_06170
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Entry
CUJ91_06170 CDS
T05548
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pgp
Paraburkholderia graminis
Pathway
pgp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CUJ91_06170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgp03400
]
CUJ91_06170
DNA repair and recombination proteins [BR:
pgp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CUJ91_06170
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CUJ91_06170
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
UB2H
Kinesin
AAA_22
DUF6827
Motif
Other DBs
NCBI-ProteinID:
AXF07558
UniProt:
A0ABD5CPQ5
LinkDB
All DBs
Position
PHS1_A:1359047..1361140
Genome browser
AA seq
697 aa
AA seq
DB search
MSEQHLTEAEDTLDESKFVRFEGSPFQLYQPYPPAGDQPTAIETLVEGIEDGLSFQTLLG
VTGSGKTFTMANTIARLGRPAIVFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPE
AYVPQRDLFIEKDSSINEHIEQMRLSATKSLMERRDVVIVATVSAIYGIGNPSEYHQMIL
TLRTGDKLGQRDIIARLIAMQYNRNEADFQRGSFRVRGDTIDIFPAEHAEMAVRVELFDD
EVETLQLFDPLTGRVRQKIPRFTVYPSSHYVTPRDTVVRAVETIKAELRERLEFFYSQGK
LVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHFSGAAPGEPPPTLVDYLPPDAIMLLDE
SHVLIGQLNGMYNGDRARKENLVDYGFRLPSALDNRPLKFNEFERKMRQVVFVSATPADY
EKKTAGQVAEQLVRPTGLVDPEIEVRPARSQVDDVLAEINERVKAGDRVLVTVLTKRMAE
QLTEFLADHGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAI
LDADKEGFLRAERSLIQTIGRAARNVNGKAILYADKVTDSMRRAIDETERRRAKQIAFNL
ERGITPRGVVKRIRDIIDGVYNVDDARAELKEQQTRAKFEDMSEKQLAKELKRLEKQMME
HAKNLEFEKAAQTRDQLALLRQRVFGANVGDHVSGVE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacaacatctgaccgaagccgaagatacgctcgacgaatccaaattcgtccgc
ttcgaaggctcgccgtttcagctctaccagccatatccgcccgccggcgaccagccgacg
gcgatcgagacgctcgtcgaaggcatcgaggacggtctctcgttccagacgctgctcggc
gtgaccggctcgggcaagaccttcacgatggccaataccatcgcgcggctcggccgtccg
gctatcgtgttcgcgccgaacaagacgctcgccgcgcagctttactcggagttccgcgag
ttctttccgcgcaacgcggtcgagtacttcgtctcgtactacgactactatcagccggaa
gcgtacgtgccgcagcgcgacctgttcatcgagaaagattcgtcgatcaacgagcatatc
gagcagatgcggctgtcggccaccaagagcctgatggagcggcgcgacgtggtgatcgtc
gcgaccgtgtcggccatttacggtatcggtaatccgtccgaataccaccagatgattctc
acgctgcgcaccggcgacaagctcggccagcgcgacatcatcgcgcggctgattgcgatg
cagtacaaccgcaacgaagccgacttccagcgcggctcgttccgcgtgcgcggcgacacg
atcgacattttcccggccgagcatgcggaaatggcggtgcgcgtggaattgttcgacgac
gaagtggaaacgctgcaactgttcgatccgcttaccggccgtgtgcgtcagaaaattccg
cgcttcacggtgtatccctcgtcgcactatgtgacgccgcgcgataccgtcgtgcgtgca
gtcgaaaccatcaaggcggagttgcgcgagcggctggagttcttctatagccagggcaag
ctcgttgaagcgcagcggctcgaacagcgcacgcgcttcgatctggaaatgttgcaggag
cttggtttctgcaaaggcattgagaattactcgcggcacttttccggcgcggcgcccggc
gagccgccgcccacgctggtcgattacctgccgccagacgcgatcatgctgctcgacgag
tcgcatgtgctgatcggccagttgaacggcatgtacaacggcgaccgcgcgcgcaaggaa
aatctggtcgactacggtttccgtctgccgtcggcgctcgacaaccggccgctgaagttc
aacgagttcgagcgcaagatgcgtcaggtcgtgttcgtgtcggccacgcccgcggactat
gaaaagaagaccgcggggcaagtggccgagcagctcgtgcgccccaccggactcgttgac
ccggaaatcgaggtgcgcccggcgcgcagccaggtggacgacgtgctcgccgaaatcaac
gagcgcgtgaaggcgggcgaccgcgtgctcgtcaccgtgctgaccaagcgcatggccgag
caattgacggagtttctcgccgaccacggcgtcaaggtgcgctatctgcacagcgacatc
gacacggtcgagcgggtcgaaatcatccgcgacttgcggctcggcacgttcgacgtgctc
gtcggtatcaacctgctgcgcgaaggtctggacattccggaagtgtcgctcgttgcgatt
ctcgacgccgacaaggaaggtttcctgcgcgccgaacgctcgctgatccagacgatcggc
cgggcggcgcgtaacgtgaacggcaaggcgatcctgtacgcggacaaggtgacggactca
atgcgccgcgcgatcgacgaaaccgagcggcggcgtgcgaaacagatcgccttcaacctc
gagcgcggcatcacgccgcgcggcgtggtgaagcggattcgcgacattatcgacggcgta
tacaacgtcgacgacgcgcgcgccgagctgaaagagcagcaaacgcgcgccaagttcgag
gacatgtccgagaagcagcttgccaaggaactgaagcgcctcgaaaagcagatgatggag
cacgcgaagaacctcgagttcgagaaagcggcccagacgcgcgaccagctcgcgttgctg
cggcagcgcgtgttcggggcgaatgtcggcgatcacgtatcgggcgtcgaataa
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