Paraburkholderia graminis: CUJ91_06410
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Entry
CUJ91_06410 CDS
T05548
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
pgp
Paraburkholderia graminis
Pathway
pgp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CUJ91_06410 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgp03400
]
CUJ91_06410 (uvrA)
DNA repair and recombination proteins [BR:
pgp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CUJ91_06410 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CUJ91_06410 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
AAA_21
AAA_29
SMC_N
AAA_16
nSTAND1
RsgA_GTPase
AAA_25
AAA_22
AAA_33
AAA_23
AAA_18
NACHT
nSTAND3
Viral_helicase1
UvrA_DNA-bind
DnaJ_CXXCXGXG
DUF4350
SbcC_Walker_B
DUF87
RNA12
Motif
Other DBs
NCBI-ProteinID:
AXF09747
LinkDB
All DBs
Position
PHS1_A:1435492..1441470
Genome browser
AA seq
1992 aa
AA seq
DB search
MRRGPLIQTVEKLSSNGIIKIRGARQHNLKNVDLDVKTGEMTVVTGPSGSGKSSLVFDTL
YAEGQRRYVETFSAYARQFLDRMDRPQVDRVDGVPPAIAIDQTNPVRSSRSTVGTMTELN
DHLKLLYARAAELFDRKTARQVRHDTPETIYAELLERTAGSDPRLVVTFPVELPESASEQ
EVEQWLSASGYTRVQAQREVDSPTGKRKLLDVVADRFRVAQADKQRVVEAIEASLKRGGG
RVNIYVLPPASDAPLAPEAQPAEPEIWRFSTGLHSPESDLRYADPQPALFSFNSAYGACD
VCRGFGRVIGVDLGLVIPDARKTLRDGAIKPMQTPAWKECQDDLMRYAAKADIRRGTPWG
ELTDAERDWVINGSPDWNGKWQSHWYGVKRFFEYLESKAYKMHIRVLLSKYRSYTPCETC
GGARLKTESLLWRLGSKANADQVLAPAQRFMPRGVEWNRAQLEALPGLTVHDLMLMPIER
IRRFFDEISLPSALLDDALKLLLAEVRTRLKYLCDVGLGYLTLDRQSRTLSGGEVQRINL
TTALGTSLTKTLFVLDEPSIGLHPRDLSRIVEAMHRLRDAGNTLVVVEHDPSVMLAADRL
IDMGPGPGERGGSIIFDGAPELIRSSGTLTGEYLGGRRHVADAAHWSQRPVDASTPRIVL
EGATEHNLRDVTVEIPLQRLVCVTGVSGSGKSTLLQDVLYPAMARHFGLATESPGAFRNL
TGADQVTDVVFVDQSPIGKTARSNPASYVGAFDEIRKLFAKAPLAQQRAYGPGMFSFNSG
DGRCPTCGGSGFEHIEMQFLSDVYLRCPDCDGRRYRAELLEVKIERGEPARALSIADVLE
LTVSEAAAYFANDAEVLRVLQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLAESAQA
RSARSAKQAVAKRLFMFDEPTTGLHFDDIAKLMQAFGKLLASGHSLIVIEHNLDVIRAAD
WIIDLGPEGGDGGGRVLCAGTPEDVKRCAESHTGVALLQYDRAMNAAAEPTDAASQGIPL
QKALSAARARRAIEGEDVVRIVNAREHNLKALDVDIPHGKFNVITGVSGSGKSTLAFDIL
FHEGQRRYLESLNAYARSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTSEVW
HFLRLLYVKLGLQHCIHDGTPVTSQSVESIAAQLLRDHKGQHVGFLAPLVVNRKGVYTDL
AKWAKARGNTHLRVDGEFVPVDPWPKLDRFREHTIELPVADLIVSADDEAQLRHALDQTL
EIGKGVMHLLAPLDGLDHAMNGGLPTAKLGAVKVLSTKRACPVCGTSYPELDPRMFSYNS
KHGWCTTCVGTGLALTREQRAAYDDTIVVDDNRGREQSLPSEEQEPEGLVDEPCPDCAGT
RLNLTARAVTFDAHAITDVAQWTVSDTRAWIDGLRMTGRDAEIARDVVSEIGSRLQFLEE
VGLGYLSLDRAAPSLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHPRDNQILLNALR
KLGDKGNTLVVVEHDEDTIRRADHIIDIGPGAGKRGGTLVAQGSVADLSAQPESLTGQFL
ASPIVHPLQPRRKVVAPGKRAAAVPENWLTVHGGKLHNLRNVTVHIPLSRLVAVTGVSGS
GKSTLARDVLMANLLDAVGRSVLSSPATRRARAAAQDKQAANQQAARRSSVLARSAPRAP
LNVTHAWQGCDSITGWESIDRVLEVDQTPIGKTPRSCPATYIGVWDAIRKLFAGTLEARA
RGYTASRFSFNTGEGRCPACEGQGVRTIGMSFLPDVKVPCDVCHGQRFNPETLAVTWRGK
NIGDVLTMEIDEAVEFFAPISNIAHPLQLMKDVGLGYLTLGQPSPTLSGGEAQRIKLVTE
LSKVRDDVTRRGQKPPHTLYVLDEPTVGLHMADVAKLIRVLHRLADGGHSVVVIEHDLDV
IAEADWIIDLGPEGGVGGGAIVAATDPEGIVQVRESHTGAALRPVLERVANAGAGSGAGV
GAVREPGEGTNG
NT seq
5979 nt
NT seq
+upstream
nt +downstream
nt
gtgagacgtggtccactcattcagacggtcgaaaaattgtcatccaacggcattatcaag
attcgcggcgcgcgccagcacaacctgaagaacgtcgatctcgacgtcaaaaccggcgaa
atgacggtcgtcaccgggccgtccggttccggcaagtcgagcctcgtgttcgatacgctt
tacgcggaagggcagcggcgctacgtcgaaacgtttagcgcttatgcgcggcagttcctc
gaccgcatggaccggccgcaggtcgaccgggtggacggcgtgccgcccgccatcgcgatc
gaccagaccaaccccgtgcgcagttcgcgctccaccgtcggcaccatgacggagctgaac
gaccacctgaagctgttgtacgcgcgcgcggccgagctgttcgaccgcaagacggcgcgc
caggtgcgtcacgacacgccggagaccatttacgcggaattgctcgaacgcacggccggc
agcgatccgcggctcgtcgtcacgtttccggtcgagttgccggagtcggcttccgagcag
gaggtcgagcaatggctgtcggcaagcggctatacgcgcgtgcaggcacagcgcgaggtc
gattcgcccaccggcaagcgcaagctgctcgacgtggtcgccgaccgcttccgcgtggcg
caggccgacaagcaacgggtggtcgaggcgatcgaggcgtcgctcaagcgcggcggcggg
cgcgtcaatatctacgtgttgccgccggcttcagacgcgccgctcgcgccagaggcgcag
ccggccgagccggaaatctggcgcttctcaaccgggctgcatagcccggaaagcgacctg
cgttatgccgatccgcagccggcgctgttctcgttcaactcggcgtacggcgcgtgcgac
gtctgccgcggctttggccgcgtgatcggcgtcgacctcggcctcgtgatcccggacgcg
cgcaagacgctgcgcgacggcgcgatcaagccgatgcaaacgcccgcgtggaaggagtgt
caggacgatctgatgcgctacgcggcgaaggccgacatccgccgcggcacgccgtggggc
gaactgacggacgcggagcgcgactgggtcatcaacggttcgccggactggaacggcaag
tggcaaagccattggtacggcgtcaaacgcttcttcgaatatctcgaatcgaaagcgtac
aagatgcatattcgcgtgctgctgtcgaagtaccgcagctacacgccgtgcgaaacctgc
ggcggcgcgcgtctgaaaacggagtcgctgctgtggcgtctcggcagcaaggctaatgcg
gaccaggtgctggcgcccgcgcagcgcttcatgccgcgcggcgtcgaatggaatcgcgcg
cagctcgaggcgctgccgggcctcaccgtgcacgacctgatgctgatgccgatcgagcgc
atccgccgcttcttcgacgaaatcagtttgccgagcgcgctgctcgacgacgcgctcaag
ctgctgctcgccgaagtgcgcacgcgcctgaaatatctgtgcgacgtcgggctcggttat
ctgacgcttgaccggcaaagccgcacgttgtcgggcggcgaagtgcagcggatcaatctg
accacggcgctcggcacgtcgctcaccaaaacgctgttcgtgctggacgaaccgagtatc
ggtctgcatccgcgcgatctgagccggatcgtggaggccatgcatcgtctgcgggacgcg
ggtaatacgctcgtggtggtggaacacgacccgtcggtgatgctcgcggcggatcggctg
atcgacatggggccgggaccgggcgagcgtggcggctcgatcattttcgacggcgcgccc
gagttgatccgttcgtcgggcacgctgaccggcgagtatctcggcgggcgccgccacgtc
gcggacgcggcgcactggtcgcagcgccctgtggacgcgagcacgccgcgcatcgtgctg
gaaggcgcgaccgagcacaatctgcgcgacgttacggtggaaattccgttgcagcggctc
gtctgcgtgacgggcgtgtcgggctcgggcaagtcgacgctgttgcaagacgtgctgtac
ccggccatggcgcggcacttcggcctcgccaccgaatcgccgggcgcattccgcaacctg
accggcgcggatcaggttaccgacgtggtgttcgtcgaccagtcgccgatcggcaagacc
gcgcgctcgaatccggccagctacgtcggcgcgttcgacgaaatccgcaagctgtttgcg
aaggcgccgctcgcgcaacaacgcgcctacgggccgggcatgttcagcttcaattccggc
gacggacgttgcccgacttgcggcggttcgggtttcgagcacatcgaaatgcagtttttg
agcgacgtgtacctgcgctgtccggactgtgacgggcgccgttaccgcgcggagctgctc
gaggtgaagatcgagcgcggcgaaccggcgcgcgcattgagcattgccgacgtgctggag
ttgaccgtcagcgaagccgccgcgtacttcgcgaacgacgccgaagtgttgcgcgtgctg
cagcccattgtcgacgtcggcctcgaatatgtgaagctcggccagccggtgcccacgttg
tcgggcggcgaagcgcagcggctcaagctcgccggctttctcgccgaatcggcccaggcg
cgcagtgcgcgcagcgcgaagcaggccgtcgccaaacggcttttcatgttcgacgaaccg
accacgggcctgcatttcgacgacatcgccaagctgatgcaggcgttcggcaaactgctc
gcaagcggccattcgctgatcgtgatcgagcataacctcgacgtgatccgcgcggccgac
tggatcatcgacctcggtcccgaaggcggcgacggcggcggccgcgtgctgtgcgcgggc
acgcccgaggacgtcaagcgctgtgccgaatcgcataccggtgtggcgctgctgcagtac
gaccgcgcgatgaacgcggcggcggaacctacagacgcggcctcgcagggcatcccgttg
cagaaggcgctgagcgcggcgcgcgcgcggcgtgcgatcgaaggcgaagacgtggtgcgc
atcgtcaacgcgcgcgagcacaacctgaaagcgctggacgtcgacattccgcacggcaag
ttcaatgtgatcaccggcgtgtccggttcgggcaagtcgacgctcgcgttcgacattctt
tttcacgaaggccagcgccgttatctcgaatcgctgaatgcgtatgcacgctccatcgtg
cagccggcagggcgccccgaggtcgatgccgtgtacggcattccgccgaccgtcgcgatc
gagcagcgcctgtcgcgcggcggtcgcaagagtaccgtcgcgaccacgtccgaagtttgg
cacttcctgcgtctgctctatgtgaagcttggcttgcagcattgcattcacgacggcaca
ccggttacgtcgcagagcgtcgagtcgatcgcggcgcagttgctgcgcgaccataagggg
caacacgtcggcttcctcgcgccgctggtggtgaaccgcaagggcgtgtacaccgatctc
gcgaagtgggccaaggcgcgcggcaatacgcatctgcgggtggacggcgaattcgtgccg
gtcgacccgtggccgaagctcgaccgcttccgcgaacacaccattgagttgccggtcgcc
gacctgatcgtgtcggcggacgacgaagcgcaattgcgtcatgcgctcgaccagacgctc
gaaatcggcaagggcgtgatgcatctgcttgcgccgctcgacggcttggaccacgcgatg
aacggcgggctgcccaccgcgaaactcggcgccgtgaaagtgctgtccaccaagcgcgca
tgtccggtgtgcggcacgagctatccggagctcgacccgcgcatgttctcgtataacagc
aagcacggctggtgcacgacctgcgtcggcaccggcctcgcgctcacgcgcgagcaacgc
gccgcgtatgacgacacgatcgtcgtcgacgacaatcgcggccgtgaacagagcttgccg
tcggaagagcaggaaccggaggggctcgtcgacgaaccgtgtccggattgcgcgggcacg
cggcttaatctcaccgcgcgcgcggtcacgttcgacgcgcacgcgatcaccgacgtcgcg
cagtggaccgtgtcggacacccgtgcgtggatcgacggtctgcgcatgaccgggcgcgat
gcggagattgcgcgcgacgtggtcagcgaaatcggcagccgcttgcagtttctcgaagaa
gtcgggctcggttatctgagcctcgaccgcgcggcgccgagcctgtcgggcggcgaggcg
cagcgcatccggcttgccgcgcagttgggcagcaatctgcaaggcgtctgctatgtgctg
gacgaaccgaccatcggcctgcatccgcgcgacaaccagattctgctgaacgcgctgcgc
aagctcggcgacaagggcaatacgctcgtggtcgtcgagcacgacgaagatacgatccgg
cgggccgatcacatcatcgacattggtcccggcgcgggcaagcgcggcggcacgctggtc
gcgcagggcagtgtggccgatctgtcggcgcagcccgaatcgctgaccgggcagttcctg
gcctcgcctatcgtgcatccgttgcagccgcgccgcaaagtcgtcgcgccgggcaagcgc
gcggcggcggtgccggagaactggctgaccgtgcatggcggcaagctgcacaatctgcgc
aacgtgacggtgcatattccgctgtcgcggctcgtcgcggtgacgggcgtcagcggttcg
ggcaagtccacgctcgcgcgcgacgtgctgatggccaacctgctcgacgcggtcgggcgt
tcggtgttgtcgtcgccggctacgcggcgggcgcgcgctgcggcgcaggacaagcaggcc
gcgaatcagcaggccgcgcgccgttcgagcgtactcgcgcgcagcgcgccgcgtgcgccg
ctgaacgtcacgcatgcgtggcagggctgcgattcgatcacgggttgggagagcatcgac
cgtgtgctggaggtcgatcagacgccgatcggcaagacgccgcgctcgtgtcccgccacg
tatatcggcgtgtgggacgcaatccgcaagctgttcgccggcacgctcgaagcgcgggcg
cgcggctacaccgcgtcgcggttctcgttcaatacgggcgaagggcgttgccccgcttgc
gaaggccagggcgtgcgcaccatcggcatgagtttcctgccggacgtcaaggtgccgtgc
gacgtgtgccacgggcagcgcttcaatccggaaacgctggcggtgacgtggcgcggcaag
aatatcggcgacgtcctgaccatggaaatcgacgaagccgtcgagttcttcgcgccgatc
tcgaacatcgcgcacccgttgcagttgatgaaagacgtggggctcggttacctcacgctc
ggtcagccgtcgccgacgttatcgggcggcgaggcgcagcggatcaagctcgtcaccgag
ttgagcaaggtgcgcgacgacgtgacgcggcgcggtcagaagccgccgcatacgttgtac
gtgctggacgagccgactgtcggcctgcatatggccgacgtcgccaagctgattcgcgtg
ctgcatcgtctcgcggacggcgggcatagcgtggtcgtcatcgagcacgatctggatgtg
atcgccgaggcggactggatcatcgacctgggtccggaaggcggcgtgggcggcggcgcg
atcgtcgcggccacggaccccgagggcatcgtgcaggtccgcgaaagtcacaccggagcc
gcgctgaggccggtgctcgagcgcgtggccaacgcaggcgccggcagcggcgcaggcgtc
ggtgctgtgcgcgaaccgggcgaaggcacgaacggctag
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