Paraburkholderia graminis: CUJ91_12430
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Entry
CUJ91_12430 CDS
T05548
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pgp
Paraburkholderia graminis
Pathway
pgp03420
Nucleotide excision repair
pgp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CUJ91_12430
03430 Mismatch repair
CUJ91_12430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgp03400
]
CUJ91_12430
Enzymes [BR:
pgp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CUJ91_12430
DNA repair and recombination proteins [BR:
pgp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CUJ91_12430
MMR (mismatch excision repair)
Other MMR factors
CUJ91_12430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AXF08634
LinkDB
All DBs
Position
PHS1_A:2814850..2817213
Genome browser
AA seq
787 aa
AA seq
DB search
MPDLLANLNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQHGLASPATILAVTF
TNKAAREMMSRLSALLPIDTRGMWIGTFHGLCNRMLRAHHRDAALPATFQILDTADQLSA
IKRLMKGLNIDDEKYPAKNLQYFINNAKEQGLRPKDVDATDNFNRKFVELYEAYDQQCQR
EGVVDFPELLLRCYELLAHNAPLRAHYQARFRHILVDEFQDTNKLQYAWLKLLAGQTNSI
FAVGDDDQSIYAFRGANVGNMRDFEQEFNVRHLIKLEQNYRSHGHILDAANQLIANNSRR
LGKNLRTDAGHGEPVRVYEAATDTQEAGWIVEEIKALINTGTSRSEVAVLYRSNAQSRTI
EHTLVNAGIAYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGIGARSI
EQLADAARLYNCSMAAAIPYVAGKAGSSLAAFANLIGKMRAETQQMSLPDTVEYVVRASG
LADFYQNEREGQDRLENLQELVNAAAAFVSEEGYGMNTPARSIPLRPGATAAPELAVATD
DPNVVVLDAPGIADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQEAVQLMTVHAAKGLE
FTAVFITGLEEGLFPHENSAMESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NIRSRFFDELPQETLKWLTPKVEAGARWGGRSDNAGYGRDWFARPDRQQGYGGGASTAAA
PLPAFANEQRAAEAGFRVGQQVFHTKFGEGTITALEGGGTDAKAQVKFKRHGEKWLALAV
AKLQAVE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctgctagccaatctcaaccccgaacaacacgccgccgtcacgctcccgaac
gagcccgcgctgattctcgccggcgcaggcagcggcaaaacgcgcgtgctcatcacgcgc
attgcgtggctcatccagcacggcctcgcgtcgccggcgaccatccttgccgtgacgttc
acgaacaaggccgcgcgcgaaatgatgtcgcgtctgtcggcgctgttacccatcgacacg
cgcggcatgtggatcggcacctttcacggcctgtgcaaccgcatgctgcgcgcgcatcat
cgcgacgccgcgctgccggccacgttccagattctcgataccgcggaccaactgtccgcg
atcaagcgcctgatgaagggcctcaacatcgacgatgaaaagtacccggcgaagaatctc
cagtacttcatcaacaacgcgaaggaacaagggctgcgcccgaaagacgtcgacgccacc
gacaacttcaaccgcaaattcgtcgagctctacgaagcctacgaccagcagtgccagcgc
gaaggcgtcgtcgattttccggagctactgctgcgctgctacgaactgctggcgcacaac
gcgccgctgcgcgcgcactatcaggcgcgcttcagacacattctcgtcgacgagtttcag
gacaccaacaagctgcaatacgcgtggctgaagctgctcgcgggccagacgaattcgatc
ttcgcggtcggcgacgacgaccagtcgatctacgctttccgcggtgcgaacgtcggcaac
atgcgcgacttcgaacaggagttcaacgtccggcatctgatcaagctcgaacagaattac
cgctcgcacggccatattctcgacgcggccaaccagttgatcgcgaataattcgcggcgc
ctcggcaagaatctccgcaccgacgccggtcacggcgagccggtgcgcgtctacgaggcc
gcgaccgacacgcaggaagccggctggatcgtcgaggaaatcaaggcgctcatcaacacg
ggcacgtcgcgcagcgaagtcgcggtgctttatcgcagcaacgcgcagtcgcgcacgatc
gagcacacgctggtgaatgcgggcatcgcgtatcgcgtgtatggcggtttgcgctttttc
gagcgccaggaagtcaagcacgcgctcgcctatctgcgcctgatcgacaatccgaatgac
gacaccgcgttcgcgcgcgtcgtcaattttccgacgcgcggcatcggcgcgcgctcgatc
gaacaactagcggacgccgcgcggctctataactgctcgatggccgcggcgattccgtat
gtcgccggcaaggcgggctcgagcctcgcggcgttcgcgaacctgatcggcaagatgcgc
gcggaaacgcagcagatgagcttgccggacaccgtcgaatacgtggtgcgcgcaagcggc
ctcgccgacttttaccagaacgagcgcgaaggccaggaccggctggagaacttgcaggaa
ctggtcaacgccgccgcggcgttcgtcagcgaagagggctacggcatgaacacgccggcg
cgctccattccgctgcgcccaggcgcgacggccgcgccggaactggccgtcgccaccgac
gaccccaacgtcgtcgtgctcgacgcgcccggcattgccgaccccgcgcaaaaccccgac
acgatgacgccgctcgcgggctttctgtcgcatgcgtcgctcgaagccggcgacaaccag
gcgcaggccggccaggaagccgtgcaactaatgaccgtgcacgcggcgaagggtctggaa
tttaccgccgtgttcatcaccggactcgaagaggggctgttcccgcatgagaacagcgcg
atggagtcggacggtctcgaagaagagcgccgcctgatgtacgtcgcgatcacgcgcgcg
aaagagcgcctgtatctgtcgtttgcgcaaagccggatgctgcacggccagacgcgctac
aacatccgctcgcgtttcttcgacgaattgccgcaggaaacgctcaagtggctcacgccg
aaggtcgaggcgggcgcgcgctggggcggccgctccgacaacgcgggctatgggcgcgac
tggttcgcgcggcccgaccgtcagcagggctatggcggcggcgcatcgacggcggcagcg
cccttgcccgctttcgccaatgaacagcgcgcggcggaagccggttttcgcgtcggccag
caggtgttccacacgaagttcggcgaaggcacgatcaccgcgctcgaaggcggcggcacc
gacgcgaaggcgcaggtcaaattcaagcgccacggcgagaaatggctcgcgctggcggtc
gccaaattgcaggcggttgagtga
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