Paraburkholderia graminis: CUJ91_12945
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Entry
CUJ91_12945 CDS
T05548
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pgp
Paraburkholderia graminis
Pathway
pgp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CUJ91_12945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgp03019
]
CUJ91_12945
03009 Ribosome biogenesis [BR:
pgp03009
]
CUJ91_12945
03036 Chromosome and associated proteins [BR:
pgp03036
]
CUJ91_12945
Enzymes [BR:
pgp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CUJ91_12945
Messenger RNA biogenesis [BR:
pgp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CUJ91_12945
Ribosome biogenesis [BR:
pgp03009
]
Eukaryotic type
90S particles
RNase
CUJ91_12945
Prokaryotic type
rRNA processing factors
CUJ91_12945
Chromosome and associated proteins [BR:
pgp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CUJ91_12945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AXF08720
LinkDB
All DBs
Position
PHS1_A:complement(2929515..2930768)
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AA seq
417 aa
AA seq
DB search
MPSSPLESRLRYEFRNAELLRQALTHRSHSSTHNERLEFLGDSVLNCAVAALLFQRFGKL
DEGDLSRVRANLVKQQSLYEIAQALNISEGLRLGEGELRSGGFRRPSILADTLEAVLGAV
FLDGGFDAAQTVIKRLYVPILDHIDPRTLGKDAKTLLQEYLQGHKIALPTYTVVATHGAA
HNQQFEVECTVPKLDVKVSGSGASRRAAEQAAAKKALDEVMAAAPAVVSKSKRSKGARAA
KKAEAEIVPGVTGVQAALDLRSPDRKNERAAARGEMRTAPAAEPIPERTAIAVAAVAAPL
AVIRAAHVEYSAPEKLERADRVERGEKADKADKLDKPAAEPKMAEAKPAEARPTDPKPAE
PAARTTDKPHRTRDAAASAAASAATSSASPATNAAAPTEHEPGVADAVQTRVADAGH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgccctcatctccgttggaaagccgtctgcgctatgaatttcgcaatgcggaattgttg
cgccaggctttaacgcaccgcagtcacagttccacgcataacgaacggctcgagtttctt
ggcgactccgttctgaattgcgcggtggctgcgcttttgttccaacgtttcggcaagctg
gacgaaggcgatttgtcgcgcgtccgtgcaaatctggtcaagcagcaatcgctgtacgaa
atcgctcaggccctgaatatttccgaaggtcttcgcctcggcgagggcgaactgcgcagc
ggcggcttccgtcggccgtcgatcctcgccgacacgctcgaagccgtgctgggcgcggtg
ttcctcgacggcggctttgacgccgcgcagacggtcatcaagcgtctttatgtgccgatt
ctcgatcacatcgacccgcgcacgctcggcaaggacgccaagacgctccttcaggaatat
ctgcagggacacaagattgcgttgccgacgtacaccgtcgtcgccacgcatggtgcggcg
cacaatcagcagttcgaagtcgaatgcaccgtgccgaagctggacgtgaaggtgtccggc
tcgggcgcgagccgccgcgcggcggagcaagccgcggcgaagaaggcgctcgacgaagtc
atggccgcggcgccggctgtcgtctccaagtcgaagcggtcgaagggcgcgcgcgcggcg
aaaaaggccgaggcggagatcgtgccgggcgtgaccggcgtgcaggcggcgctggatctg
cgcagtcccgaccgcaagaacgaacgcgcggcggcgcgcggcgaaatgcggacggcgccg
gccgctgaaccgataccggaacgcacggcgatcgcggtggcggccgtcgctgcgccgctc
gcggtgattcgcgccgcgcatgtcgagtacagcgcgccggagaagctggagcgcgcggac
agggtcgaaaggggcgaaaaggcggataaagccgacaagctagacaagcccgccgccgaa
ccgaagatggccgaagcgaagcccgccgaagccaggcccaccgacccaaaacccgccgaa
cccgccgcccgcacaaccgacaagccgcaccgcactcgcgacgccgcggctagtgcggcg
gccagtgcagcgaccagctccgcatcgcccgccaccaacgcggcggcgcccaccgaacac
gaacccggcgtagccgacgcggtacaaacgcgcgtcgccgacgcgggccattga
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