Paraburkholderia graminis: CUJ91_13505
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Entry
CUJ91_13505 CDS
T05548
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
pgp
Paraburkholderia graminis
Pathway
pgp00630
Glyoxylate and dicarboxylate metabolism
pgp00680
Methane metabolism
pgp01100
Metabolic pathways
pgp01120
Microbial metabolism in diverse environments
pgp01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CUJ91_13505
09102 Energy metabolism
00680 Methane metabolism
CUJ91_13505
Enzymes [BR:
pgp01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
CUJ91_13505
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4_10
Fer4_21
Fer4
Fer4_6
Fer4_9
Fer4_Nqo3
Fer4_15
Fer4_2
Fer4_NDSU1
Fer4_16
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
AXF08815
LinkDB
All DBs
Position
PHS1_A:3046973..3049951
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AA seq
992 aa
AA seq
DB search
MSDMLNSTAGAPKQVPSAGGCGSGNCACKSQAQAQTQAPRSYFDETDFGTPARHADVDVT
LEIDGQAVTVPAGTSVMRAAVEAGVNVPKLCATDSLEPFGSCRLCLVEIEGKRGYPASCT
TPVEAGMKVRTQTDRLQSLRRNVMELYISDHPLDCLTCPANGDCELQDMAGVTGLREVRY
GFDGANHLNDKKDESNPYFTYDPAKCIVCNRCVRACEETQGTFALTIAGRGFESRVAASE
NQPFMDSECVSCGACVAACPTATLQEKTVIMLGQAEHSAVTTCAYCGVGCSFKAEMKGNQ
VVRMVPFKNGQANEGHACVKGRFAWGYATHKDRITKPMIRAKITDPWREVSWEEAINYAA
SEFRRIQAKHGRDSIGGITSSRCTNEETYLVQKLVRAAFGNNNVDTCARVCHSPTGYGLK
TTLGESAGTQTFASVDKADVIMVIGANPTDGHPVFASRLKRRVREGAKLIVVDPRRIDIV
DTPHVKASHHLQLRPGTNVAVVNALAHVIVTEGLLNEAFIAERCEGRAFEQWRDFVALPE
NAPEATEAVTGVPAKDVREAARIYATGGNAAIYYGLGVTEHAQGSTMVMGIANLAMATGN
IGREGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHISDTIVRSQFEDAWNVSLQTEPGLR
IPNMFEAALDGSFMGLYCQGEDIVQSDPNTHHVAAALSAMECIVVQDIFLNETAKYAHVL
LPGSTFLEKDGTFTNAERRISRVRKVMPPVPGYADWEVTLLLSRALGYEMDYTHPSEIMD
EIARLTPTFHGVSYKKIDELGSIQWPCNEEAPDGTPTMHVDTFVRGKGKFVITKFIASPE
KVTRKFPLLLTTGRILSQYNVGAQTRRTENSRWHDEDRLELHPHDAEERGIKTGDWVGIE
SRAGQTVLRAKVTERMQPGVVYTTFHFPESGANVITTESSDWATNCPEYKVTAVQVMPVE
QPSEWQKEYSRFNAEQLELLKQRELANATSGK
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacatgctcaactctactgccggcgccccgaagcaagtcccctcggcgggcggc
tgcggatccggcaactgcgcgtgcaaatcgcaagcgcaggctcaaacgcaagccccgcgc
tcgtacttcgacgaaaccgatttcggcacgcccgcgcgtcatgcggacgtcgacgtgacg
cttgaaatcgacggccaggcggtcacggtgccggccggcacatcggtgatgcgcgccgcc
gtcgaagcaggcgtgaacgtgccgaagctttgcgcaaccgattcgctggaaccgttcggc
tcgtgccgtttgtgtctcgtcgagatcgaaggcaagcgcggttatccggcctcgtgcacg
acgccggtcgaagccggcatgaaagtgcgcacgcaaaccgaccgtctgcaatcgctgcgc
cgcaatgtgatggagctgtacatctccgatcacccgctcgattgcctgacctgccccgcg
aacggcgactgcgaactgcaggacatggcgggcgtgaccggcctgcgcgaagtgcgctac
ggtttcgacggcgcgaatcacctgaacgacaagaaggatgaatcgaatccgtacttcacc
tacgatccggcgaagtgcatcgtctgcaatcgctgcgtgcgcgcgtgcgaggaaacgcaa
ggcacgttcgcgctgaccatcgccgggcgcggtttcgaatcgcgcgtggccgcgagcgaa
aaccagccgttcatggattcggagtgcgtgtcgtgcggcgcgtgcgtggccgcttgcccg
accgcgacgttgcaggaaaagaccgtgatcatgctgggccaggccgagcattcggccgtc
accacctgcgcgtattgcggcgtcggctgctcgttcaaggcggagatgaagggcaaccag
gtcgtgcgcatggtgccgttcaagaacggccaggcgaacgaaggacacgcgtgcgtgaag
ggccgcttcgcatggggctacgcaacacacaaggatcgcatcacgaagccgatgatccgc
gcgaagatcaccgacccgtggcgcgaagtgagctgggaagaagcgatcaattacgcggcc
tcggaattccgccgcattcaggcgaagcacgggcgcgattcgatcggcggcattacgtcg
tcgcgttgcacgaacgaagaaacctatctggtgcagaagctcgtgcgcgccgcgttcggc
aacaacaacgtcgacacctgcgcacgcgtttgccactcgccgaccggctacggtctgaag
acgacgctcggcgaatcggcgggcacgcagaccttcgcctcggtcgataaagccgacgtc
atcatggtgatcggcgcgaatccgaccgacggccatccggtgttcgcctcgcgtctgaag
cgccgcgtgcgcgaaggcgcgaagctgatcgtggtcgatccgcgccgcatcgacatcgtc
gatacgccgcacgtgaaggcatcgcatcatctgcaattgcgccccggcaccaacgtcgcg
gtggtcaacgcgctcgctcatgtgatcgtcaccgaagggctgctgaacgaagcgttcatc
gccgaacgctgcgaaggccgcgcgttcgagcaatggcgtgatttcgtcgcgctgccggag
aatgcgcccgaagcaacggaagccgtgaccggcgtgccggccaaggacgtgcgtgaagcc
gcgcgcatctacgcgacgggcggcaacgcggcgatctactacggcttgggcgtcaccgaa
cacgcgcaaggctcgacgatggtgatgggcatcgcgaaccttgcgatggcgacgggcaac
atcggccgcgaaggcgtcggtgtgaatccgctgcgcggccagaacaacgtgcagggttcg
tgcgacatgggctcgttcccgcatgagttgccgggctatcgccacatcagcgacacgatc
gtgcgctcgcagttcgaagacgcgtggaatgtctcactgcaaaccgagccgggtctgcgc
attccgaacatgttcgaagccgcgctcgacggcagcttcatgggcctgtactgccagggc
gaggacatcgtgcagtcggacccgaacacgcatcatgtggcggcggcgttgtcggcgatg
gaatgcatcgtcgtgcaggacattttcctgaacgagaccgcgaagtacgcgcatgtgctg
ctgcccggctcgaccttcctcgaaaaggacggcaccttcacgaacgcggagcgccgcatc
tcgcgcgtgcgcaaggtcatgccgccggtgccgggttacgccgactgggaagtcacgctg
ctgctctcgcgcgcgctcggctacgaaatggactacacgcatccgtccgaaatcatggac
gagatcgcgcgtctcacgccgaccttccacggcgtgtcatacaagaagatcgacgagctg
ggcagcatccagtggccgtgcaacgaagaggcgccggacggcacgccgaccatgcacgtc
gacacgttcgtgcgcggcaagggcaagttcgtgattaccaagttcatcgcgtcgccggaa
aaagtcacgcgcaagttcccgctgctgctgacgacggggcgcatcctgtcgcagtacaac
gtgggcgcgcaaacgcggcgcacggagaactcgcgctggcacgacgaggaccggctcgaa
ctgcatccgcacgacgcggaagaacgcggcatcaagacgggcgactgggtcggcatcgaa
tcgcgcgcgggacaaaccgtgctgcgcgcgaaagtgaccgagcggatgcagccgggcgtc
gtttatacgacgttccacttccccgaatcgggcgcgaacgtgatcaccaccgagagttcg
gactgggcgaccaactgtccggaatacaaggtgaccgccgtgcaggtgatgccggtcgaa
cagccgtccgagtggcagaaagagtattcgcgcttcaacgcggagcaactcgagttgctc
aagcagcgcgagctggccaacgcgacgtcgggtaagtga
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