Paraburkholderia graminis: CUJ91_15455
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Entry
CUJ91_15455 CDS
T05548
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pgp
Paraburkholderia graminis
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgp03016
]
CUJ91_15455
Enzymes [BR:
pgp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CUJ91_15455
Transfer RNA biogenesis [BR:
pgp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CUJ91_15455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Usp
MetJ
Motif
Other DBs
NCBI-ProteinID:
AXF09154
LinkDB
All DBs
Position
PHS1_A:complement(3465702..3467831)
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AA seq
709 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFDKPGAAELMQEADAV
AQDIDLDFLWECAPDDEFPFATLGAEYFGERFGPTERAALVLRMHGAPVYFRRKGRGMYQ
RAPQEQLKMALAGLERKRQQALVQQGYEEELKAGRLPEAFTGKTALALLTKPDKNTIEYK
ALEAAAAARGISQARLMLECGAIPSARALHEARFLAEFFPHGTGFPPVTLGSLPDDLPEA
NVQAFSIDDITTTEIDDAFSVEHLADGRVRIGVHIAAPALGIQRGDEVDAIARTRLSTVY
MPGDKITMLPDSVVDAFTLAEGGLRPALSLYVIVNRETQEIVASETRAERVFVKNNLRHN
TLDELVTEEALAAGTGEYPHKEDIAVLWPFAQALFEKRQAARAGYGLRREVQRNTDFNFY
VEGEHITITPRRRGSPLDTIVAELAILANSSWGAFLHDHGVPGIYRTQRAFGAPTGPKRT
RMQTNAAPHEGLGVTQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKPKDADLF
AVVQGFDDTYTAYADHQRRMEYFWCLRWLKQENRKQVVASVVKGDLVRLEEIPLLLHVPG
LGVHARGTRLQMEVMSIDELTVEASVRLLHVLDAPTVTSGSEAEEADEADEADEGEEEEI
VEASDESAEREAEAQAEADAEGDSNANDASSNEGSSNADAGQHITEPGR
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggcagtttcaaggccggcagcgtgctgtcgcgccag
ggcgatgcgtttcaggtcgagttgccgggcggccgccgcgccaaggtgcgcgccaaggat
gtgctgatcgagttcgacaagccaggcgcggccgagttaatgcaggaagcggacgccgtc
gcgcaggacatcgatctcgacttcctgtgggaatgcgcgcccgacgacgagtttccgttc
gccacgctcggcgcggaatatttcggcgagcgtttcggtccgaccgaacgcgcggcgctg
gtgctgcgcatgcatggcgcgccggtgtatttccgtcgcaagggtcgcggcatgtatcag
cgcgcgccgcaggagcagctcaagatggcgctcgccggtctcgaacgcaagcgccagcag
gcgctcgtgcagcagggctacgaggaagagctgaaggccggccgtttgcccgaggcgttc
accggcaagacggcgctcgcgttgctgaccaagcccgacaagaacaccatcgagtacaag
gcgctcgaagccgccgcggccgcgcgcggcatctcgcaggcgcggctgatgctggaatgc
ggcgcgattccgtcggcgcgtgcgttgcacgaggccagattcctcgccgagtttttcccg
cacggcaccggttttccgccggtcacgctcggcagcttgccggacgatttgccggaagcc
aacgtgcaggcattctcgatcgacgacatcacgaccactgaaatcgacgacgcgttctcc
gtcgagcatctcgcggacggccgcgtgcggatcggcgtgcacatcgccgcgccggcgctc
ggcattcagcgcggcgatgaggtcgatgcgattgcgcgcacgcgtctgtcgacggtttat
atgccgggcgacaagatcacgatgctgcccgacagcgtcgtcgatgcgttcacgctcgcc
gagggcggtttgcgtccggcgctgtcgctctatgtgatcgtcaatcgcgagacgcaggaa
atcgtcgcgagcgaaacccgcgccgagcgtgtgttcgtgaagaacaatctgcgtcacaac
acgctcgacgaactcgtcaccgaagaagcgctcgccgccggaacgggcgagtatccgcac
aaggaagacatcgcggtgttgtggccgttcgcgcaggcgctgttcgaaaagcgtcaggcc
gcgcgcgcgggctacggtctgcgccgcgaggtgcagcgcaataccgacttcaacttctac
gtcgaaggcgaacacatcacgattacgccgcgccggcgcggttcgccgctcgacacgatc
gtcgccgaactggcgattctcgcgaattcgtcgtggggcgcgttcctgcacgatcacggc
gtgccgggcatctatcgcacgcagcgcgcgttcggagcgccgaccggccccaagcgcacg
cgcatgcagaccaatgccgcgccgcacgaagggctcggcgtcacgcagtacgcgtggagc
acgtcgccgctgcgccgttacgtcgacctggtgaatcagtggcagttgctcgcgtgcgtg
cagcatggcgtgaccgccaagctggccgcgccgttcaagccgaaagacgccgatctgttc
gccgtcgtgcaaggtttcgacgatacgtataccgcgtacgccgatcatcagcgtcgcatg
gaatatttctggtgcctgcgctggctcaagcaggagaacaggaagcaggtggtggcgtcg
gtggtgaagggcgatctggtgcggctcgaagaaattccgttgctgctgcatgtgccgggg
ctcggcgtgcacgcacgcggcacgcgcctgcagatggaagtgatgtcgatcgacgaattg
actgtcgaggcgtccgtgcgtcttctgcatgtgctcgacgcgcctactgtgacgagcggc
agcgaagcggaagaggcggacgaagcggacgaagcggacgaaggcgaagaagaggagatc
gtcgaggcatcggatgaaagcgccgagcgcgaagccgaggcgcaagccgaagcggatgcc
gaaggcgattccaatgcgaacgatgcttcgagcaacgaaggttcgtcgaatgccgacgcc
gggcagcacattacggaacccggacgatga
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