Paraburkholderia graminis: CUJ91_16415
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Entry
CUJ91_16415 CDS
T05548
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pgp
Paraburkholderia graminis
Pathway
pgp00300
Lysine biosynthesis
pgp00470
D-Amino acid metabolism
pgp01100
Metabolic pathways
pgp01110
Biosynthesis of secondary metabolites
pgp01120
Microbial metabolism in diverse environments
pgp01230
Biosynthesis of amino acids
Module
pgp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CUJ91_16415 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CUJ91_16415 (lysA)
Enzymes [BR:
pgp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CUJ91_16415 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
S-methyl_trans
SH3BP5
Motif
Other DBs
NCBI-ProteinID:
AXF09327
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All DBs
Position
PHS1_A:3666416..3667678
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AA seq
420 aa
AA seq
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MTRPAFDYVDGVLHAEGVSAVSLAEQFGTPLYVYSRAALTAAWNAYAGACAGRRASVHVA
VKANSNLAVLNVFARLGAGFDIVSGGELARVLAAGGKAENTVFSGVGKHANEMREALAAG
VKCFNVESIPELDRLNQVAEQMGKKAPVSLRVNPDVDAKTHPYISTGLKSNKFGVAFEDA
RATYQAAAAMANLEVVGIDCHIGSQITEIAPYLDAVDKVLELVEQIEQDGVTIRHIDVGG
GLGITYDDETPPDIGEFVRTVLDRIEARGHGHREVYFEPGRSLVGNAGVLLTRVEFLKPG
AEKNFAIVDAAMNDLARPAMYDAYHAIDAAVKRDVPAHVYDIVGPVCESGDWLGRERLLS
VEPGDLLAIRSAGAYGFAMSSNYNTRPRAAEVMVDGTQAHVVRAREEVQQLFSGEAILPA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgactcgacctgcatttgactacgtcgacggcgtgcttcacgccgaaggcgtgtccgcc
gtttcgctcgccgaacagttcggcacgccgctctatgtttattcgcgcgccgcgctcacc
gccgcgtggaacgcgtacgccggcgcatgcgccggccgtcgcgcgagcgtgcacgtcgcc
gtcaaggccaacagcaatctcgcggtgctgaacgtgttcgcgcgcctcggcgcgggcttc
gacatcgtgtcgggcggcgaactggcgcgcgtgctggccgccggcggcaaagcggaaaac
acggtgttttccggcgtcggcaagcatgccaacgaaatgcgcgaggcgctcgcggcgggc
gtcaagtgctttaacgtcgagtcgataccggagctcgatcggctgaaccaggtcgctgag
caaatgggcaagaaggcgccggtctcgctgcgcgtgaatccggatgtcgacgcgaaaacg
catccgtatatttccaccgggctcaagtcgaacaagttcggcgtcgcgttcgaagatgcg
cgcgcgacctatcaggcggccgcggccatggcgaacctcgaggtggtcggcatcgactgc
catatcggttcgcagattaccgagatcgcgccttatctcgacgcggtcgacaaagtcctc
gaactggtcgagcagatcgagcaggacggcgtcacgatccgccatatcgacgtgggcggc
ggtctgggcattacttacgacgacgagacgccgccggatatcggcgagttcgtgcgcacc
gtgctcgaccggatcgaggcgcgcggccacggccatcgcgaggtgtacttcgagccgggc
cgctcgctcgtcggcaatgcgggcgtgctgctcacgcgcgtcgagttcctgaagccgggc
gctgaaaagaacttcgccatcgtcgatgcggccatgaacgatctcgcccgtcccgcgatg
tacgatgcgtatcacgcaatcgacgccgcggttaagcgcgacgtgccggcgcatgtctac
gacatcgtcggtcccgtttgcgaaagcggcgactggcttggacgcgagcggctgctgtcc
gtggagccgggtgatctgctcgcgattcgttcggccggcgcctatggcttcgcgatgagt
tcgaactacaacacgcgtccgcgcgcagcggaagtgatggtcgatggtacacaggcgcat
gtggtccgcgcgcgcgaggaagtccagcaactgttttcgggcgaagcgatcttgccggcg
taa
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