Paraburkholderia graminis: CUJ91_19120
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Entry
CUJ91_19120 CDS
T05548
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pgp
Paraburkholderia graminis
Pathway
pgp00250
Alanine, aspartate and glutamate metabolism
pgp00310
Lysine degradation
pgp00350
Tyrosine metabolism
pgp00650
Butanoate metabolism
pgp00760
Nicotinate and nicotinamide metabolism
pgp01100
Metabolic pathways
pgp01120
Microbial metabolism in diverse environments
Module
pgp_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CUJ91_19120 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CUJ91_19120 (gabD)
00310 Lysine degradation
CUJ91_19120 (gabD)
00350 Tyrosine metabolism
CUJ91_19120 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
CUJ91_19120 (gabD)
Enzymes [BR:
pgp01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
CUJ91_19120 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
CUJ91_19120 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
CUJ91_19120 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AXF10119
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Position
PHS1_B:complement(208055..209527)
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AA seq
490 aa
AA seq
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MSLALTRNELIRPLNFIDGKWIAAANGARFPVTNPATGETIVEVANSSAADARAATDAAA
RALPAWRDTLPRERAEILRRWHALIVANTEDLAKLMSTEQGKPLAESRGEVAYGASYVAW
FADEATRIYGDIIPQQQRGKRMSAVKEPIGIVAAITPWNFPLAMIARKIAPALAAGCTVI
AKPAEDTPLTALALAALAQEAGVPDGVLNMLSASREQGIEAVADWLADARVRKITFTGST
PVGKHLARESAATLKKLSLELGGNAPFIVFDDADLDAAVAGLMAAKFRNGGQTCVCPNRV
YVQAGVYERFADLLAKRVGALKVAPATDEGAQIGPMINERAIDKIARHVEDAVKQGANVL
TGGKRLTELGPNYYAPTVLTNAQDDMLVCCEETFGPVAPLFRFNDEAEAIRLANDTPFGL
AAYFYTQDVRRINRVAARLEAGVIGINEGAVSSEAAPFGGVKESGYGREGSKYGLDDYLS
IKYLCQGSLD
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcgcattgacgcgcaatgaactgatccgtccgctgaattttatcgacggcaaa
tggatcgccgccgcgaacggcgcgcgctttcccgtcacgaatccggcgacgggcgagacg
atcgtcgaggtcgcgaacagcagtgccgcggatgcgcgcgccgccaccgacgccgccgct
cgcgcgctgcccgcgtggcgcgacacgctgccgcgcgagcgcgcggagattctgcgccgc
tggcatgcgctgatcgtcgcgaacaccgaagatctcgcgaagctgatgtcgacggaacaa
ggcaagccgctcgcggaaagccgcggcgaagtcgcttacggcgcgtcgtacgtcgcgtgg
ttcgccgacgaagccacgcgcatttacggcgacatcattccgcagcagcagcgcggcaag
cgcatgagcgcggtgaaggagccgatcggcatcgtggccgccatcacgccgtggaatttc
ccgctcgcgatgatcgcgcgcaagatcgcgcccgcgctcgcggccggttgcacggtgatt
gccaagcccgccgaagacacgccgctgaccgcgcttgcactcgccgcgctcgcgcaggaa
gccggcgtgcccgacggcgtgctgaacatgctgtcggcttcgcgcgaacaaggcattgaa
gccgtggccgactggctcgccgatgcccgcgtgcgcaagattacattcaccggttcgaca
ccggtcggcaagcatcttgcgcgcgagtccgcggccacgttgaagaagttgtcgctcgaa
ctgggcggcaacgcgcccttcatcgtattcgacgatgcggacctcgacgcggccgtcgcg
ggactgatggccgccaagtttcgcaacggcggacagacctgcgtatgcccgaatcgcgtc
tacgtgcaggccggcgtttatgaacgtttcgccgatctgctcgccaaacgcgtcggggcg
ctgaaggttgcgcctgcaacggacgagggcgcgcaaatcggcccgatgatcaacgagcgc
gcgatcgacaaaatcgcgcgtcacgtagaagatgccgtaaaacaaggggcaaacgtgttg
acgggcggcaagcgcctgaccgagctgggcccgaattactatgcgcccacggtgctgacc
aacgcgcaggacgacatgctggtgtgctgcgaagagacctttggaccggtcgcaccgctg
ttccgcttcaacgacgaagccgaagccatccgtctcgcaaacgacacgccgttcggtctt
gccgcttacttctatacgcaggacgtgcggcgcatcaaccgcgtggccgcccggctcgaa
gcaggcgtgatcggcatcaacgagggcgcggtgtcgagcgaagccgcgccgttcggcggc
gtgaaggaatcgggctatggccgcgaaggctcgaagtacggactcgacgattatctgtcg
atcaagtacctgtgtcagggcagcctcgattga
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