Paraburkholderia graminis: CUJ91_22680
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Entry
CUJ91_22680 CDS
T05548
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
pgp
Paraburkholderia graminis
Pathway
pgp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CUJ91_22680
Enzymes [BR:
pgp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
CUJ91_22680
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Ortholog
Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
PdeR_N
PAS_9
PAS_4
PAS
PAS_8
Diguanyl_cycl_sensor
GGDEF_2
PAS_3
Motif
Other DBs
NCBI-ProteinID:
AXF10751
UniProt:
A0ABD5CNK5
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All DBs
Position
PHS1_B:complement(1000316..1002319)
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AA seq
667 aa
AA seq
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MNDDQHEQVLFAQFGTSSPCWRLSSDSNALELTPVTGDVPANVAIPLNPQQASQIRCLTG
ITSHVVLDVRLFGEPLRLHLVGRKINSISWAGTASAYDDTESVARDLMHGLSFAEQVVSE
VNSVVVIVDRHGRIQRFNRLAEELTGVKEENIIGRNVWALFMSSEDGAASSQNIAGFFNR
GVSYEVERRVKTLHGERLFLFRNKFVQSGSGIDEQYLICSGTDITEERLAQERLRQLANT
DSLTGLPNRNAIQDYIRTAIEEAAPGESVGVLFLDLDNFKKVNDHYGHVFGDRLIRDVSA
AIGMCLNEGDTLARLGGDEFIVLAAKGTAHELEATAQRILERMRTPFSLGLVEVYTGCSI
GIARYPEHGDNLESLIRSADTAMYVAKDEGKRTHRVFSPEMNRKVAEYMWLDTNLRRGLD
EGQLTLHYQPKLVLSTGVVQGVEALVRWNSPERGQIMPAEFIRYAEESGLIGVLGRWVME
TAAKQAAKWKADGYNLRIAINVSARQLVDTAVVRHFTEALAAANLEPCLVDVELTESCLI
EDEAAAIDLIKHFRQIGAQVHLDDFGTGYSSLSQLGRIPLDVIKLDRSFVRSINADTKAQ
ALVRSMVVVAQELGFKVVAEGIETESEEAFMKGLGVEYVQGYLYAHPMPAADFERWLQDR
QKLRLIA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacgaccaacacgagcaggtgctttttgcgcagttcggcacaagcagcccttgc
tggcgtctgtcgagcgacagcaacgcgctcgaactgacgccagtcaccggggacgtgccg
gccaacgtggccattccgctgaatccccagcaggcatcgcaaatccgttgcctcacgggc
atcacctcgcatgtggttctcgacgttcgcctgttcggcgagccgctgcggctgcatctc
gtcggcagaaaaatcaacagcatcagttgggcgggcacggcctcggcttatgacgacacg
gagtcggtcgcgcgcgatctgatgcatggtttgtcgttcgccgagcaggtcgtgtcggaa
gtcaattctgtggttgtgatcgtcgaccggcatgggcgaatccagcgctttaaccgcctc
gccgaagaactgacgggcgtgaaggaagagaacatcatcgggcgcaatgtgtgggcgctg
ttcatgtcctcggaagacggcgcggcgtcgagccagaacattgcgggcttcttcaatcgc
ggcgtgtcgtacgaagtcgagcggcgcgtgaagacgctgcacggcgagcggctcttcctg
tttcgcaacaagttcgtgcaaagcggcagcggcatcgacgagcaatatctgatctgctcg
ggcaccgacatcaccgaagaacgtctcgcgcaggaacgcctgaggcaactcgccaacacc
gactcgctcaccggcctgccgaatcgcaatgcgattcaggactacattcgcaccgcgatc
gaagaagcggcgcccggcgaatcggtgggcgtgctgtttctcgatctcgacaacttcaag
aaggtcaacgatcactacggccacgtattcggcgaccgtctgattcgcgacgtgtcggcc
gccatcggcatgtgcctgaacgaaggcgacacactcgcgcggctcggcggcgacgagttc
atcgtgcttgcggcaaaaggcacggcgcacgaactggaagcgaccgcgcagcgcatcctc
gaacgcatgcgtacgccgttcagcctcgggctcgtcgaagtctatacgggctgctcaatc
ggcatcgcgcgctatccggaacacggcgacaacctggagtcgctgatccgctcggccgat
accgccatgtacgtcgccaaagacgaaggcaagcgcacgcatcgcgtgttctcgccggag
atgaaccgcaaggtcgccgagtacatgtggctcgacacgaacttgcggcgcggcctcgac
gaaggccaactgacgctgcactatcagccgaagctggtgctttcaaccggcgtggtgcaa
ggcgtggaagcgctggtccgctggaattcgccggagcgcgggcagatcatgccggccgaa
ttcattcgttatgccgaggagtcgggactgatcggcgtgctcggccgctgggtcatggaa
acggccgccaaacaggccgccaaatggaaagcggacggctacaacctgcgcatcgccatc
aacgtgtcggcgcggcaactggtggacaccgccgtggtccggcatttcaccgaagcgctc
gccgcggccaatctcgaaccctgcctcgtcgatgtcgagttgaccgagagctgcctgatc
gaagacgaagccgcggccatcgacctcatcaagcacttccgccagatcggcgcgcaggtg
catctggacgacttcggcaccggctattcgtcgctgtcgcaactgggccgcattccgctc
gacgtcatcaagctcgaccgcagcttcgtgcgctcgatcaacgccgacacgaaagcgcaa
gcgctcgtgcgctcgatggtcgtggtcgcgcaggaactcggcttcaaggtggtcgccgaa
ggcatcgagaccgaatcggaagaagccttcatgaaggggctgggcgtcgagtacgtgcaa
ggctatctgtacgctcacccgatgcccgccgccgatttcgagcgctggttgcaggaccgg
cagaagctcaggctgatcgcctga
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