Paraburkholderia graminis: CUJ91_22865
Help
Entry
CUJ91_22865 CDS
T05548
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
pgp
Paraburkholderia graminis
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgp03000
]
CUJ91_22865 (prpR)
Transcription factors [BR:
pgp03000
]
Prokaryotic type
Helix-turn-helix
Other families
CUJ91_22865 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
PAS_8
PAS_4
Mg_chelatase
AAA
AAA_2
AAA_3
HTH_Tnp_ISL3
AAA_16
HTH_23
PAS_7
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AXF12381
LinkDB
All DBs
Position
PHS1_B:1043068..1045107
Genome browser
AA seq
679 aa
AA seq
DB search
MSTFTPAFVNADPGRPGIALVSISRLQSLCETIAPRYAGRARFFSIREGYGAAVTALQAH
VDAGSVDVVLAAGSNGAYLREHLSVPVVMVKVNGFDVLSAITRATAARPGAPIGLVLHET
ISHELADLGGWLNVRLTQRAYRSVDEVRTAVNDLAAEGCRVIIGPGMACDLAQQAGLDSV
FLYSLGAVEEAFERSVELARVSRQKESKRVRLNTIVAHLRDGVAAFDDAGQLEAVNPAML
DLLGLTGDRHGDRHRDNDRDRDVPAELARTLGPWLREAAERGDAADERIEQIGERSLIVN
CVPILEQGARSGSVVTVQDALVAQRIDRSLRTSQRPKHLVARHRLDDLVGGSAALERVRR
LARAGAAHDATVLLTGESGTGKELVAQGIHNASRRRGNPFVAFNCAALPEGLIESELFGH
EEGAFTGARRGGKPGLFEIAHTGTIFLDEIGEMPAALQSRLLRVLQEREVMKLGSGRATP
IDVRVIAATHRDLHALVERGAFRADLYFRLNLLQIELPPLRERRADVVPLARHLLSRGSR
QYGLSEASIGRVLQFLAPLFERYAWPGNVRELENLLTRAAIYLGDAAGDLDRDIGPDLLA
LFPEFDRMQREGGKDAVRIAPNAHAADAASAPAAPRITPTRDDVAKALEQCGGNRAAASR
ALGIGRTTLWRLLKADDAR
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
ttgtccacgttcacgcctgctttcgtcaacgccgaccccggccggcccggcatcgccctc
gtcagtattagccgcctgcagtcgctttgcgagactatcgcgccgcgctacgccggccgc
gcccgatttttctcgatccgcgaaggctatggcgccgcggtcacagcgctccaggcgcac
gtcgatgccggttccgtcgatgtcgtgctcgccgccggctcgaacggcgcgtatctgcgc
gagcacctcagcgtgccggtggtcatggtcaaggtcaacggcttcgacgtgctgagcgcg
atcacccgcgccaccgccgcgcggccgggcgcgccgatcggccttgtgctgcacgaaacc
atctcgcacgaactcgccgatctcggcggctggctgaacgttcgtctgacgcagcgcgcc
taccgttcggtcgatgaggtgcggaccgccgtcaacgatctggccgccgagggctgccgc
gtcatcatcggtcccggcatggcttgcgatctggcgcagcaggcgggtctggacagcgtg
tttctgtactcgctcggcgcggtcgaggaagccttcgagcgttcggtcgagctcgcccgc
gtgagccggcagaaggaatcgaaacgcgtgcgcctgaacacgatcgtcgcgcatctgcgc
gacggcgtggccgctttcgacgacgccggccagctcgaggccgtcaatcccgcgatgctc
gatctgctcggcctgaccggcgaccgccacggcgaccgccaccgcgataacgaccgcgac
cgcgatgtgcccgccgaactcgcccgcacgctcggcccgtggctgcgcgaagcagcggag
cgcggcgacgccgccgacgagcgcatcgagcagatcggcgaacgttcgctgatcgtcaat
tgcgtcccgattctcgagcagggcgcgcgttccggctccgtggtcacggtgcaggacgcg
ctcgtcgcgcagcggatcgaccggtcgctgcgcacgagccagcggccgaagcatctggtc
gcgcggcatcggctggacgatctggtcggcgggtccgcggcgctcgaacgcgtgcggcgg
ctcgcgcgcgcaggcgcggcgcacgacgcgaccgtcctgctgaccggcgagagcggcacc
ggcaaggagctggtcgcgcagggcatccacaacgcgagccggcggcgcggcaatccgttc
gtcgcgttcaattgcgcggcgctgccggaaggcttgatcgaaagcgagctgttcggccac
gaggagggggcgttcaccggcgcgcggcgcggcggcaagccgggcctgttcgagatcgcc
cacacggggaccattttcctcgacgaaatcggcgagatgcccgccgcgctgcaaagccgg
ctgctgcgcgtgctgcaggaacgcgaggtaatgaagctcggctcgggccgcgcgacgccc
atcgacgtgcgggtgatcgccgccacgcatcgcgatctgcatgcgctcgtcgagcggggc
gcgtttcgggcggacctgtattttcgtctgaatctgcttcagatagaattgccgccgctg
cgcgagcggcgcgccgatgtcgttccgctcgcccggcacttgttaagccgcgggtcgcgc
caatatgggttgtcggaggcgtcgatcgggcgggtgctgcagtttctggcgccgctgttc
gagcgctacgcgtggccgggcaatgtgcgcgaactggaaaatctgctgacgcgcgcggcc
atttatctcggcgacgcggcaggcgatctcgaccgtgacatcgggcccgatctgctggcg
cttttcccggaattcgaccggatgcagcgcgaaggcggcaaagatgcggttcgtattgct
cccaacgcgcacgccgccgacgccgccagcgctccagcggcgccccggatcaccccgacc
cgcgacgacgtcgcgaaggcgctcgagcagtgcggcggcaatcgcgcggcggcaagccgg
gccttgggcataggccgaaccacactgtggcggctgctcaaagccgacgacgcacgatag
DBGET
integrated database retrieval system
