Paraburkholderia graminis: CUJ91_24115
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Entry
CUJ91_24115 CDS
T05548
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
pgp
Paraburkholderia graminis
Pathway
pgp00260
Glycine, serine and threonine metabolism
pgp01100
Metabolic pathways
Module
pgp_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CUJ91_24115
Enzymes [BR:
pgp01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
CUJ91_24115
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
CUJ91_24115
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
NAD_binding_8
Pyr_redox_3
DAO
Pyr_redox
FAD_binding_2
HI0933_like
GIDA
NAD_binding_7
FAD_binding_3
AlaDh_PNT_C
XdhC_C
Thi4
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AXF10996
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Position
PHS1_B:complement(1333040..1336042)
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AA seq
1000 aa
AA seq
DB search
MSQKDRLPNGGRINRALPLTFTFNGRQYQGYQGDTLASALLANGLHFVARSWKYHRPRGI
VTAGVEEPNAVVQLETGAYTVPNARATEVELYQGLVANSVNAKPSIEKDRMAVNQKIARF
IPAGFYYKTFMWPRKFWPKYEEVIRDAAGLGKAPEQLDADRYDKCFAHCDVLVVGGGPTG
LAAAHAAALSGARVTLVDDQPELGGSLLSCRAEIDGKPALQWVHKIEDELRQMPGVKILS
RSTAFGYQDHNLVTVTQRLTDHLPVSQRKGTRELMWKIRAKRVILATGAHERPIVFGNND
LPGVMLASAVSTYLHRYAVLPGRDAIVFTNNDDGYQCALDLKAAGAQVTVIDPRAGESKG
TLPALARRYGVKVINGAVITAAHGKLRVASVDVASYANGQVGAKQGELPCDLLAMSGGWS
PVLHLFAQSGGKAHWHDDKACFVPGKAMQPETSVGACNGDFTLGQGIRFAVDAGVEAARA
AGYIVKRPNTVQVAEITEAKMQPLWLVGGRELATRGPKQFVDFQNDVSAADIFLAAREGF
ESVEHVKRYTAMGFGTDQGKLGNINGMAILAQALGKTIPETGTTTFRPNYTPVTFGTFAG
RELGEFLDPVRKTAVHEWHVENGAEFEDVGNWKRPWYFPKKGEDLHAAVARESLAVRTSV
GILDASTLGKIDIQGPDSAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMIFDDGVTVRLA
DQHYMMTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVC
HDIDFANAAFPFMSYREGTVAGAASRVMRISFSGELAYEVNVPANVGRAVWEALMAAGAE
FDITPYGTETMHVLRAEKGYIIVGQDTDGSMTPYDVGMGGLVAKSKDFLGKRSLTRSDTA
KAGRKQLVGLLADDPSFVIPEGSQIVAGPFQGETAPMLGHVTSSYYSPILKRSIAMAVVK
GGLDKIGETVTVPLSSGKQIAAKITSSVFYDSEGARQHVE
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaagaccgactcccgaatggcgggcgcatcaaccgcgcattgccgctcacg
ttcaccttcaacggacgccagtatcagggctatcagggcgacacgcttgcttccgcgttg
ctcgcgaacggcctgcatttcgtcgcgcgtagctggaagtatcaccggccgcgcggcatc
gtgaccgcgggcgtggaagaaccgaatgccgtcgtgcaactcgaaacgggcgcgtacacg
gtgccgaatgcgcgtgccactgaagtcgagctgtatcaggggctcgtcgcgaatagcgtg
aacgcgaagccgagcatcgagaaggatcgcatggcggtcaatcagaagatcgcgcgcttt
attccggcgggcttctactacaagaccttcatgtggccgcgcaagttctggccgaagtac
gaagaagtgattcgcgacgcggcgggtctcggcaaggcgccggagcaactcgacgccgat
cgctacgacaagtgcttcgcgcattgcgacgtgctggtggtcggcggcgggccgacgggt
ctcgcggccgcgcatgcagcggcgttgtcgggcgcgcgcgtgacgctcgtcgacgatcag
ccggaactcggcggctcgctgctgtcgtgccgcgcggagatcgacggcaagccggctttg
caatgggttcacaagatcgaagacgaattgcggcaaatgcccggcgtgaagattctgtcg
cgcagcacggcgttcggctatcaggaccacaatctcgtcaccgttactcagcgtctgacc
gatcatctgccggtgtcgcaacgcaagggcacgcgcgaactgatgtggaaaatccgcgcg
aaacgcgtgattctcgcgaccggcgcgcatgaacggcccatcgtgttcggcaacaacgat
ctgcctggcgtgatgctcgcgtcggcggtgtcgacgtatctgcatcgctatgccgtgctg
ccgggccgcgacgcgatcgtcttcacgaataacgacgacggctatcaatgcgcgctcgat
ctgaaagcagccggcgcgcaagtcacggtgatcgacccacgcgcgggcgaatcgaaggga
acgttgcctgcgctcgcacgccgctatggcgtgaaggtgatcaacggtgcggtgatcacg
gcggcgcacggcaaattgcgcgtggcttccgtcgatgtcgcttcgtacgcgaatggtcag
gtgggcgccaagcagggcgaattgccgtgcgatctgctcgcgatgtcgggcggctggagt
cccgtgctgcatctgttcgcgcaatcgggcggcaaggcgcactggcatgacgacaaagcc
tgcttcgtgcccggcaaggcgatgcagccggaaacgagcgtgggcgcctgcaatggcgac
ttcacgctaggccagggcattcgtttcgccgtcgatgccggcgtcgaagcggcgcgcgcc
gcgggctatatcgtcaagcggccgaacaccgtgcaagtcgccgagatcaccgaagcgaag
atgcagccgctgtggctcgtcggcggacgcgaactcgccacgcgtgggccgaagcagttc
gtcgacttccagaacgacgtatcggccgcggatattttccttgccgcgcgcgaaggcttc
gagtcggtcgaacacgtgaagcgttataccgcgatgggcttcggcaccgatcagggcaag
ctcggcaacatcaacggcatggcgattctcgcgcaggcgctcggcaagacgattccggaa
accggcacgacgacgttccgcccgaactacacgccggtcacgttcggcacgttcgcgggg
cgcgagctcggcgagtttctcgatcccgtgcgcaagacggcggtgcacgaatggcacgtc
gaaaacggcgcggaattcgaggacgtcggcaactggaagcgcccctggtactttccgaag
aagggcgaagacctgcatgcggccgtcgcgcgcgaatcgctcgcggtgcgaacgagcgtc
ggcattctcgatgcgtccacgctcggcaagatcgacattcagggccccgattcggcgaag
ctgctgaactgggtctatacgaatccgtggagcaagctcgaagtcggcaagtgccgctac
ggtctgatgctcgacgaaaacggcatgatcttcgacgacggcgtgaccgtgcgcctcgcc
gaccagcactacatgatgacgaccacgaccggcggcgccgcacgcgtgctgacgtggctc
gaacgctggctgcaaaccgagtggcccgacatgcgcgtgcgcctcgcgtcggtcacggat
cactgggcgaccttcgccgtggtcggcccgaatagccgcaaggtcttgcaaaaggtttgc
cacgacatcgacttcgcgaacgcggcgtttccgttcatgagctatcgcgaaggcacggtc
gcgggcgcggcgtcgcgcgtgatgcgcatcagcttctcgggcgaactcgcgtatgaagtg
aacgtgccggcgaacgtcggacgcgcagtgtgggaagcgttgatggccgcgggcgccgaa
ttcgacatcacgccgtacggcacggaaacgatgcacgtgttgcgcgcggagaagggctac
atcatcgtcggtcaggataccgatggttcgatgacgccgtatgacgtcggcatgggcggg
ctcgtcgcgaagtcgaaggactttctcggcaagcgttcgctcacgcgctcggacacggcg
aaggcggggcgaaagcaactggtcggactgctcgcggacgatccgtcgttcgtgataccc
gaaggctcgcagatcgtcgcgggtccgttccagggcgagaccgcgccgatgctcgggcac
gtcacgtcgagctattacagcccgattctgaagcgctcgatcgcgatggcggtcgtgaag
ggcggcctcgacaagatcggcgagacggtcacggtcccgctttcgagcggcaaacagatt
gcagcgaagatcaccagctcggtgttctacgacagcgaaggagcgcgtcaacatgtggaa
tga
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