Paraburkholderia graminis: CUJ91_24340
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Entry
CUJ91_24340 CDS
T05548
Name
(GenBank) helicase
Organism
pgp
Paraburkholderia graminis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
AAA_22
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AXF11032
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Position
PHS1_B:complement(1389892..1393380)
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AA seq
1162 aa
AA seq
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MSSVFFDRERIAEWLGDNTVAKARAVGPVTNMQWHGATLTGDVQGSQPEPYRTRVRFRTD
GGTPWAQSDCSCPVGRNCKHVAALLLAELEYHDEMDHITRVDDDERSDSAPLVTQRASVE
RFGPPQGVRPELVSWLERLRARAEAADAAAQKTAAARTETLAYRLNWSDFHMRHEVVLYR
ARCDADGRIVEVGETWGNVESALLKQPRFVSDEDLSILRGLWLGRSREDFGQFILRGTSG
AEMLQKLIATGRLFFDFKLAPGDDAPTPLARAADRPGRIEWEPLADQRLRPVLRTEPRAS
MVLPTEPVWYVDGDAREAGIVRSSLPFQQLPDYLAMPPISLAEAPLVASVLREVAPELPL
PPTHDTSAIRVIDVEPVPVLTLNSHALPSAAKTSKPGKAGNVAKSQAVELAGVSFDYDGV
SINVDSSVTLVPMPGGDVIHIRRRYDAEKKRLLELRKTGLQKVPTSRVFASRLLPDTMLG
LPDAEAWSAFVNDAVPELVSKGWRVTMAPEFRYNVIEIDAIDGTAHQAGDGWFDLEMGIR
IGERNVRLEPLLADLFRRDRRWLGGALETIADDEPIELKTEENKRLRLRADRLKPVVRVL
VDLFDSLGGTLADGAPLRVPSVDAGRLQALSDTGRWQFRGDDSIRQLAERLQAGPRLREV
PVPAALRAQLRAYQQQGLNWMQYLREQGLAGVLADDMGLGKTVQTLAHILAEKEAGRLDK
PALIVVPTTLVHNWREEARRFAPELKVLVLNGPQRKERFEQIGEHELILTTYALLWRDQK
VLAEHQYHLLILDEAQYVKNATTKAAQAIRGLSARHRLCLTGTPLENHLGELWSQFDFLL
PGFLGSQKDFTRRWRNPIEKNNDGVRRSLLARRIRPFMLRRRKDEVAKELPAKTTIVCSV
DLEGAQRDLYETVRTAMQEKVRAAVSAQGLARSHIIVLDALLKLRQVCCDPRLVRTLRTA
QNVGEVSEGSSAHTARASDKTEKGVRSAKLDLLLSMLPELIDEGRRVLLFSQFTGMLSLI
AQALDEAAIPYVILTGDTTDRVTPVQRFQQGEVPLFLISLKAGGVGLNLTAADTVIHYDP
WWNPAAENQATDRAHRLGQDKPVFVYKLIAAGSIEEKIVELQEQKAGLADSILSEDAAGA
AKFSDDDLDALFAPMPELEGSK
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcagttttctttgatcgcgaacggattgcagagtggctcggtgataacaccgtc
gccaaggcgcgcgcggtcggccctgtcaccaacatgcaatggcacggagccacactgacg
ggcgacgtgcagggcagccagcccgagccctaccgaacccgcgtgcgctttcgcacggac
ggcggcacgccgtgggcgcagagcgattgcagttgtccggtcggccgcaattgcaagcat
gtggccgcgctgctgcttgccgagctcgagtatcacgacgagatggaccacatcactcgc
gtcgacgacgatgagcgcagcgacagcgcgccgctcgtgacgcaacgtgcgtcggtggaa
cgcttcggtccgccgcagggcgtgcgccccgagctcgtgagctggctcgaacgcttgcgt
gcgcgcgctgaagccgccgatgccgccgctcagaaaacggctgccgcccgcaccgaaacg
ctggcctaccggctcaactggtccgacttccacatgcgccacgaggtggtgctgtatcgc
gcgcgctgcgatgcggatggccgcatcgtcgaggtcggcgagacgtggggcaatgtagag
tcggcgctgctcaagcagccccggttcgtgtcggacgaagatctgtcgattctgcgcggc
ctgtggcttggccgttcgcgcgaagacttcgggcaatttattctgcgcggcacgagcggc
gcggaaatgctgcaaaagctgatcgcgaccgggcgcctcttcttcgacttcaagctcgcg
cccggcgatgacgcgccgacgccgctcgcgcgcgccgccgaccggccggggcgcatcgaa
tgggaaccgcttgccgaccagcgtctgcgtcccgtgctgcgcaccgagccgcgcgcgagc
atggtgctgccgaccgagcccgtctggtacgtggatggcgacgcgcgggaggcgggcatc
gtgcgctcgtcgctgccgttccagcaattgcccgactacctcgcgatgccgccgatctcg
ctggccgaagcgccgctcgtcgcgtccgtgctgcgcgaagtcgcgcccgagttgccgttg
ccgcctacccacgacacatcggcgattcgcgtgatcgatgtcgaacccgtgcccgtgctt
acgctgaacagccacgcgttgccgtccgctgcaaagaccagcaagcctggcaaggcgggc
aacgtcgccaaaagccaggccgtcgaactggccggcgtgagcttcgactacgacggcgtc
agcatcaacgtggacagcagcgtcacgctcgtgcccatgccgggcggcgacgtcatccat
attcgccgccgctacgacgccgagaaaaagcgcctgctcgaactgcgcaagaccgggttg
cagaaggtgcccacgagccgcgtgttcgcgtcgcgtctgttacccgacacgatgctcggc
ttgcccgatgccgaagcgtggtccgcgttcgtcaacgacgccgtgcccgaactcgtcagc
aagggctggcgtgtgacgatggcgcccgagttccgctacaacgtgatcgagatcgatgca
atcgacggcaccgcgcatcaggccggcgacggctggttcgatctggaaatgggcatccgc
atcggcgagcgcaacgtgcggctcgaaccgctgctcgccgatctgttccggcgcgaccgg
cgctggcttggcggcgcgctcgaaaccatcgccgacgatgagccgatcgagctcaagacc
gaagagaataagcgcttgcggctgcgcgccgaccggctcaaaccggtggtgcgtgtgctg
gtcgatctgttcgattcgctcggcgggacgctcgccgatggtgcgccgctgcgcgtgccg
tccgtcgacgcaggccgtttgcaggcgttgagcgacacaggccgctggcaattccgtggc
gacgattcgatccgccagctcgccgagcgtctgcaagccggtccgcgtttgcgcgaggtg
ccggtgcccgcggcgttgcgcgcgcaattgcgcgcttatcagcagcagggcctgaactgg
atgcagtatctgcgcgagcaaggtcttgccggtgtgctcgccgacgacatgggcctcggc
aaaaccgtgcagacgctcgcgcacattctcgcggagaaagaggccggacggctcgacaag
cccgcgctgatcgtcgtgccgaccacactcgtgcacaactggcgcgaggaagcgcgacgc
tttgcacccgagctgaaagtgctggtgctcaacggcccgcaacgcaaggagcgcttcgag
cagatcggcgaacacgaactgattctgacgacgtacgcgttgttgtggcgcgatcagaag
gtgctcgccgagcatcaatatcacctgctgattctcgacgaagcgcagtacgtgaagaac
gccacgacgaaagccgcgcaggcgatccgtgggttgagcgcgcgccatcgtctgtgtctg
accggcacgccgctcgagaatcacctcggcgaattgtggtcgcagttcgattttctgctg
cccggatttctcggcagccagaaggacttcacgcgccgctggcgcaatccgatcgaaaag
aataacgacggcgtgcgccgctcgttgctcgcgcgccgcatccggccattcatgctgcgg
cgtcgcaaggacgaggtcgcgaaagaactgccggccaagacgacgattgtatgttccgtc
gatctcgaaggcgcgcagcgcgatctctacgaaaccgtgcgcacggcgatgcaggaaaag
gtgcgcgccgcggtgagcgcgcagggcctcgcgcgcagccacatcatcgtgctcgatgcg
ctgctgaagttgcggcaggtgtgttgcgatccgcgtctcgtgcgcacgctgcggactgct
cagaacgtcggcgaagttagcgaaggttcgagcgctcatacggcacgggcttccgataaa
acagagaagggtgtgcgttccgccaagctcgatctgttgctctcgatgctgcccgaactg
atcgacgaaggccgccgcgttctgctgttctcgcagttcaccggcatgttgtcgctgatc
gcgcaagcgctcgacgaagccgcgattccctacgtgatcctgacgggcgacacgaccgac
cgcgtcacgcccgtgcagcgttttcagcaaggcgaagtgccgttgttcctgatcagcctg
aaggcgggcggcgtgggtctgaacctgaccgccgccgacacggtgattcactacgacccc
tggtggaatccggccgccgagaatcaggccaccgaccgcgcgcatcggctcggtcaggac
aagcctgtgttcgtctacaagctgatcgcggcaggcagcatcgaagaaaagatcgtggaa
ttgcaggagcagaaggcgggcctcgccgacagcattctctcggaagacgccgcaggcgcc
gccaaattctccgacgacgacctcgacgcgctctttgcgccgatgcccgagctggaaggc
tcgaagtga
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