Paraburkholderia graminis: CUJ91_24890
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Entry
CUJ91_24890 CDS
T05548
Name
(GenBank) LysR family transcriptional regulator
KO
K21757
LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
Organism
pgp
Paraburkholderia graminis
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgp03000
]
CUJ91_24890
Transcription factors [BR:
pgp03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CUJ91_24890
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
MarR_2
HTH_20
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AXF12421
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Position
PHS1_B:1504298..1505197
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AA seq
299 aa
AA seq
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MNLRALQCFVILAEELNFSRAAERLHIAQPALSQQIRSLEDRLGTQLVDRARRPLALTEA
GHYLCTEARQILGALEQAGLATQEIGVGRRGWLSVGFTRSAMYSILPPALKAFHHAYPQV
ELKLFEMLTEEQTDALRDMRIHIGIGRQPLAIDGCTSYPLLRERVMVALEPGHPLAAQKK
VKIADLADTPLILYPKHQNAQFKRSVLSLYRDAGLTPLVAHQAYEIQTAIALVAAGLGVT
FIGESVARLGRSDVVYRHLTGPGSTHRSTLAATFRTDDASPHLRAFLACLPPPIADAAL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttagggctctacagtgcttcgtgattcttgcagaggagctcaatttcagccgc
gccgcggagcgcttgcatatcgcgcagcccgcgctcagccagcagatccgttcactcgaa
gaccggctcggcacgcagcttgtcgatcgcgcgaggcgtccgctcgcgctcacggaagcc
ggccactatctttgcacagaggctcgccagatactcggcgcattggagcaggccggcctc
gcgacgcaggaaatcggcgtgggccggcgcggctggctcagcgtcggcttcacgcgctcg
gcgatgtacagcatcttgccgcccgcgctcaaggcatttcatcacgcgtatccgcaagtg
gaattgaagctcttcgagatgctcaccgaagaacagaccgatgcgttgcgcgacatgcgc
attcatatcggcatcggccggcagccgctggccatcgacggttgcacgtcatatccgctg
ctgcgcgaacgggtcatggtcgcactggagcccggtcatccgctcgccgcgcagaagaaa
gtcaaaatcgccgatctcgcggatacgccgttgatcctttatccgaagcatcagaatgcg
cagttcaagcgctcggttctatcgttgtatcgggacgccggtctgacgccgctcgtcgct
catcaggcgtatgaaatccagactgcaatcgcgctcgtggcggccggactcggcgtcacc
ttcatcggcgaatccgtcgcgcggctcggccgcagcgacgtcgtgtatcgccatctgacc
gggcccggttcaacgcatcgctcgacgctcgccgcaacttttcgtacagacgacgcttca
ccccatttgcgtgcattcctcgcctgtctgccgccgccaattgcggacgcagcactataa
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