Paraburkholderia graminis: CUJ91_25240
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Entry
CUJ91_25240 CDS
T05548
Name
(GenBank) glycogen debranching enzyme
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pgp
Paraburkholderia graminis
Pathway
pgp00500
Starch and sucrose metabolism
pgp01100
Metabolic pathways
pgp01110
Biosynthesis of secondary metabolites
Module
pgp_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
CUJ91_25240
Enzymes [BR:
pgp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
CUJ91_25240
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Gene cluster
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Motif
Pfam:
Alpha-amylase
ISOA1-3_C
CBM_48
pulA_all-beta
Motif
Other DBs
NCBI-ProteinID:
AXF11197
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All DBs
Position
PHS1_B:complement(1586407..1588497)
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AA seq
696 aa
AA seq
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MSSANVDSQRTYVARPGSRFPPGASVVPGGVNFCIFCRHAARLELLLYASPDSIAPFQIV
GLTPETNRTFYFWHVLIEDLPEQCCYTWRAYGRHGVPQLDDEASSRFELLDPGARAVSDR
RWRRQPAAAVREREHASLRAIVTEPLGEREDVSVRTLDDAIIYELHVGGFTRDSSSGVQH
PGTFSGLIEKIPYLKDLGITHVELLPVMAFDEQDVPAPAAAIGLVNYWGYSTHSFYSPHP
GYSVEPGRAPQEFRAFIDAMHAAGIQVLLDVVFNHTAEAGASGPVINFKVLANEVFYHVD
PAQGGRYLDYTGCGNTVNCNHPLVSAFILRCLEYWVQEFGVDGFRFDLASVFTRGEGGAL
LGTPPLPWAMEASPVLARVPLIAEAWDAAGLYHVGAFPGMAWAEWNGRYRDVIRRFVRGD
PGMIGQMCTCLAGSADLYQADGRLPVNSINFVTCHDGFTLRDLVSYDAKRNEANGDDNRD
GSNDNLSWNCGEEGDSNDPSIVRLRLRQGRNFIAILLLSQGVPMLLAGDEILRTQRGNNN
AYCQDNELSWTDWRFSDDSLDMLRFVREMIALRKRHPSLRRRRFFTGGTEHGQTHPDVAW
HGERLGAPAWGDPQARLVAFTLAAQALDEPMLHVIFNMNADGRDVELPALDHANWRRLVD
TAAELPSKVVSNIETARVERGICRVESRSVVVLESR
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
ttgagcagcgctaacgtcgatagccagcgtacttatgtagcgcggcccggctcacgattt
ccgcctggtgcgtcggtcgtgccgggcggcgtgaatttctgtattttctgccggcacgcg
gctcgcctggaactgctgctttacgcttcgccggatagcatcgcaccgttccagatcgtc
ggactaacgcccgaaacaaaccgcacattctatttctggcatgtgttgatagaagacctt
ccggagcaatgctgctacacgtggcgtgcatacggccgtcatggtgttccgcaactggat
gacgaagccagcagccgttttgagttgctcgatcccggcgcgcgcgcggtcagcgatcgg
cgatggcgccgccagcccgctgccgctgtacgggagcgagagcatgcttcgctgcgagcc
atcgtcaccgaaccgctgggcgaacgcgaagacgtgagcgtgcgcacactcgatgacgcg
atcatctacgagctgcatgtaggcggattcacgcgcgattcgtcgagcggcgttcaacac
cccggaacgttctcggggctgatcgagaaaatcccctatctgaaggatttgggcatcacg
cacgtggagttgctgccggtgatggctttcgatgagcaggacgtgcctgcaccggctgca
gcgatcggcctcgtcaattactggggctacagcacgcatagcttctactctccgcatcct
ggctatagcgtcgaacctgggcgcgcgccgcaggagttccgtgcgttcatcgatgcgatg
cacgcggccgggatccaggtgctgctggacgtggtgttcaatcacacggcggaagcgggc
gcgagcggccctgtgatcaatttcaaggtgctcgccaacgaagtcttctatcatgtcgat
ccggcgcaaggaggacgttatctcgactacaccggctgcggcaatacggtcaactgcaat
catccgctggtgtcggcgttcatcctgcgttgtctcgagtactgggttcaggaattcggc
gtggacggttttcgttttgacctcgcgagcgtattcacgcgcggcgagggcggtgcattg
ctaggtacgccgccgttgccgtgggcaatggaagcttccccggtactcgcgcgcgtgccg
ctgatcgcggaggcctgggacgcggcggggctgtatcacgtcggcgcgtttccgggcatg
gcgtgggccgagtggaacgggcgttaccgtgacgtgatccggcgcttcgtgcgcggcgat
cctggaatgatcggccagatgtgcacgtgtctcgctgggagcgctgatctttaccaggcg
gacggcagattgccagtgaacagcatcaacttcgtcacctgccacgacggcttcacgctg
cgcgatctcgtcagctacgacgcgaagcgcaacgaggccaacggcgacgacaaccgcgat
ggcagcaacgataacctctcgtggaattgcggcgaggaaggcgactcaaacgatccgtcg
atcgtccgtctgcgtttgcggcaggggcgcaacttcattgcgatcctgctgctgagccag
ggggtacccatgcttctcgccggcgatgaaatcctgcgtacccagcgcggcaacaacaac
gcttactgccaggacaacgaactgtcgtggacggactggcgtttctccgatgactccctt
gacatgctgcgtttcgtgcgcgagatgatcgcgctgcgcaagcgtcacccgagcctgcgt
cgtcgccggttcttcacgggcggtacggagcatggccaaacgcatcccgatgtggcgtgg
cacggggaacggctcggagcgcccgcatggggagacccgcaggctcgcctcgtcgcgttc
acgctcgcggcacaggcgctcgacgagcccatgttgcacgtcatcttcaacatgaacgca
gacgggcgcgatgttgagcttcccgcgctcgaccacgcgaactggcggcggctcgtcgat
acggctgcggaactgccgtcgaaagtcgtttcgaacattgaaacggcccgcgtcgagcgc
ggtatctgccgcgtcgaatcgcgcagtgtagtcgtacttgaatcgagatga
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