Paraburkholderia graminis: CUJ91_29080
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Entry
CUJ91_29080 CDS
T05548
Name
(GenBank) farnesyl-diphosphate farnesyltransferase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pgp
Paraburkholderia graminis
Pathway
pgp00100
Steroid biosynthesis
pgp00909
Sesquiterpenoid and triterpenoid biosynthesis
pgp01100
Metabolic pathways
pgp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
CUJ91_29080
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
CUJ91_29080
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pgp01006
]
CUJ91_29080
Enzymes [BR:
pgp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
CUJ91_29080
Prenyltransferases [BR:
pgp01006
]
Terpene biosynthesis
Squalene/phytoene synthase
CUJ91_29080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AXF11869
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All DBs
Position
PHS1_B:complement(2458204..2459250)
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AA seq
348 aa
AA seq
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MPTPTRAFLLGPLLKGVSRSFYLTLRVLPVGMRDPIGLAYLLARAADTIADTSLIAPEQR
LQLLLSLRDQINGVANDGALFQRMAAEVAGQQSQSDEKLLLESLGPALDVLTQLSEPDRK
AVRAIVSTLTEGMEFDLRTFPDERSGRIAALREYGELDRYTYLVAGCVGEFWTTTTYAHM
PGTLKERPDIMAARGVRFGKALQMTNVLRDCGKDLRIGRCYLPQKMLEQHGLSPQDLLLP
ANSLRARPLMVELLRKTLDHFREALDYTLAIPAFSVRLRLACLWPILIGLETLLLLVDNK
AWLDPQQVSKVRRNKVYGIIASSLVLVSSNTLVRRSIEQRIRDIEARF
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgccgactccgacccgggcctttcttctcggtccgctcctgaaaggcgtatcacgctcg
ttctaccttacgcttcgcgtgttgccggtgggcatgcgcgatccaatcggcctcgcctat
ctgctcgcgcgtgccgccgataccatcgcggatacctcactgatcgcgccggaacagcgg
ctccaattgctgctgtcattgcgcgatcagatcaacggcgtggcaaacgacggcgcgctg
tttcagcgcatggccgctgaagtggcgggccagcagagccagtcggacgagaagctgctg
ctcgaatcgctcggtcccgcgctagacgtgctgacgcaattgagcgagccggaccgcaag
gccgtgcgcgcgattgtgtcgacgttgaccgaaggcatggaattcgacctgcgcacgttc
cccgacgaacgctcgggccgcatcgcggcgctgcgcgaatatggtgagctcgaccgctat
acgtatctggtggcgggttgcgtcggcgaattctggaccacgacgacctacgcgcatatg
cccggcacgctgaaggagcggccggacatcatggccgcccgcggtgtgcgcttcggcaag
gcgctgcaaatgaccaacgtattgcgcgattgcggcaaagacctgcgcattggtcgctgc
taccttccgcaaaagatgctggaacagcacggccttagcccgcaagatcttttgctgccg
gccaattcgctgcgcgcgcgtccgctgatggtcgaattgttgcgcaagacgctcgatcat
ttccgtgaggcgctcgattacacactcgcgattcccgctttttccgtgcgcctgcggctc
gcatgtttgtggccgattctgatcggcctcgaaacgctgctgctgctcgtggacaacaag
gcgtggctcgatccgcagcaggtttcgaaggtgcggcgaaacaaggtgtatgggatcatc
gcgtcgtcgctggttttagtttcgtccaatacattggtgcgtcgatcaatcgagcagcgc
attcgggacatcgaagcgcgcttctga
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