Paraburkholderia graminis: CUJ91_33120
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Entry
CUJ91_33120 CDS
T05548
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pgp
Paraburkholderia graminis
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgp03400
]
CUJ91_33120
DNA repair and recombination proteins [BR:
pgp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CUJ91_33120
Archaeal homologous recombinant proteins
CUJ91_33120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_29
AAA_23
ABC_tran
DUF1664
AAA_21
Pox_A_type_inc
AAA_22
RsgA_GTPase
YobI-ATPase
AAA_27
Motif
Other DBs
NCBI-ProteinID:
AXF12811
LinkDB
All DBs
Position
pPHS1_P:336699..339020
Genome browser
AA seq
773 aa
AA seq
DB search
MRPLKLTLTGFIGVRDGMKRESVSLDLTSLPTGLIALTGPNGAGKSTIMDNLHPYRIMPS
HASKLSVDGFSYWDHLYGTHALKEFEWEHGGVRYRSSFAFRKPGKTGKAEYFLAWCDASG
TWQPMQTGNGTVSDGKAETYDACVESVCGSLESFFTSVFSAQNRRPLASYGASEIKALLA
ELLHIDHLRTLAAKAGDVVKVLARELDATHQQLGALGAKRDRVVQIDQAIASDVQSLVAA
RESREALNASAVRLSDQRAVLVAKQTANVDAQARLRELAGRRSQIASSLQALANDSAADD
RRFAQRLSALRESIAGHNAVIAQRDSILGASAARDGAQARLAALEARVEPMQQAIAALEA
KQLELTAATSRINGLMSEGESKASLLKSLEQQASVIAAVPCAGHAMHNTCPLLAQAREAN
AKVPEQRISLNNLRVAFRTSREAVDRLTPEVQQLATRRAELKTLSAEIAASRRDLQMAID
LAARKPLLDAATEGVRKASEELAAVEAEAKAVRERRQVQQESLSSQARELDAEVARLGAE
DVSAAIADLDRQLTQCRDGITAADARIESLIRSQATREVERQAIANELAGFDATQSRANR
ISDEIASWKLLAKGLGNEGVIALTIDDAGPALTKTVNDLLLACYGMRFTVEIQTQRALAS
GDLREGFEILVHDADIDSTKAVTVMSGGQKVWINECLTRGIALYLASNAGQPYQTLFSDE
SDGPLDPQRKLQFMRMKREVLRQGGYEREFFISQTPDLVAEADAVINVEALAA
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccactaaagctgaccctgacgggtttcatcggtgtgcgcgacggcatgaaacgc
gagagcgtctcgctggatctcacgtcgctgccgactggccttatcgcgttgacgggtccg
aacggcgcggggaaatccacgatcatggataacctgcatccgtaccggatcatgccgtcg
cacgcgtccaagctgtctgttgacggattctcgtactgggaccacctgtacgggacgcac
gcgctcaaggagtttgaatgggagcacggcggcgtccgttaccgctcatcgtttgcattc
cgcaaaccggggaaaactggcaaggctgagtatttccttgcatggtgcgacgcgagcggc
acatggcaaccgatgcagaccggaaacggcactgtgtcagacgggaaagccgaaacctac
gatgcgtgcgtcgagtcggtatgcggctcgctggagtcatttttcaccagcgtcttctct
gcgcagaaccgtcggccgctcgcgtcctatggtgcgagcgaaatcaaggcactgctcgcg
gagcttctgcatatcgaccatctgcgcacgctggcggcgaaagccggcgacgtcgtgaag
gttctcgcccgtgagctcgatgcgacgcaccagcagcttggtgcactcggggcgaagcgc
gaccgtgttgtgcagattgatcaggccatcgcttcagatgtccagtcactcgtcgcggct
cgggagagccgggaggcactcaatgcgagcgcagtcaggctgagtgatcagcgcgcagtt
ctggttgcaaaacagactgcgaacgtggatgcgcaagcgcggttgcgggaactggccgga
cgacgcagtcagatcgcttcgtcgttgcaggcgctggcgaacgacagcgcggctgacgat
cgccgctttgcgcagcgcctgtctgccttgcgcgagtcgattgccggtcacaacgcggtg
attgcgcagcgcgattccatcctgggtgctagcgctgcgcgcgacggtgcccaggcacgc
ctggcggcccttgaagcgcgtgtcgagccaatgcagcaggccatcgcggcactggaggcc
aagcagcttgaattgaccgcggccacttcacgcatcaacgggctcatgtccgagggtgag
tcgaaggcgtcgttgctcaagtctctggaacagcaggctagcgtgatcgctgccgttccc
tgtgcgggtcacgcgatgcataacacgtgccctctgcttgcccaggcgcgtgaagccaat
gcgaaggttcccgagcagcgcatttcgctcaacaaccttcgtgtcgcgtttcgcacgagc
cgcgaagcagtggatcgtttgacgcccgaagtgcagcagcttgctacgcggcgcgccgaa
ctgaagacgctgtcggcagagattgccgcttcgcggcgtgatctgcaaatggctatcgat
cttgcggcacgcaagccgttacttgatgcagcaaccgaaggcgttcgcaaggccagtgaa
gaactggccgccgtggaagccgaggcgaaggctgttcgcgagcgacgacaggtacagcag
gaaagcctgtcgtcgcaggcgagggagctcgacgcagaagttgcacggctcggtgccgaa
gacgtgagcgctgcaattgctgatctggaccggcaactgacgcaatgtcgtgacggcatc
actgcagccgatgcgcggatcgaatcgctgatccgttcacaggcgacacgtgaggtcgag
cggcaggcgatcgcaaacgagcttgcgggattcgacgcgacgcagtcccgtgcgaaccgt
atctccgatgagatcgcaagctggaagctgcttgcgaagggtcttggcaacgaaggtgtg
atcgccctgacgatcgatgatgcgggcccggcgctgacgaagacggtgaacgacctgctg
cttgcctgttacggcatgcgcttcacggtcgagatccagactcaacgcgcactggcaagc
ggcgacctgcgcgagggatttgaaatcctcgtgcatgacgccgatatcgacagcaccaag
gcagtgacggtgatgtcgggtggccagaaggtctggatcaacgaatgtctgacccgcggc
attgcgctgtatctggccagtaacgccggccagccatatcagacgctgttcagcgacgag
tccgatggtccgctcgatccgcagcgcaagctgcagttcatgcgcatgaagcgggaagtt
ttgcggcagggcggctacgagcgggagtttttcatctcacaaacgccggatctggttgcc
gaagcggacgccgttatcaatgtcgaggcgcttgccgcctga
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