Planococcus glaciei: FK545_10275
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Entry
FK545_10275 CDS
T06125
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
pgq
Planococcus glaciei
Brite
KEGG Orthology (KO) [BR:
pgq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgq03021
]
FK545_10275 (sigB)
Transcription machinery [BR:
pgq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FK545_10275 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
DUF1492
HNF-1_N
Sigma70_ECF
HTH_3
HTH_37
DUF134
KORA
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QDY45668
LinkDB
All DBs
Position
2037073..2037855
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AA seq
260 aa
AA seq
DB search
MSKRSHPNQPTKEQVLEWIEAYQKNEDEEAQTMLVMNYKRLVESIARKYSNGKSYHEDIA
QVGMLGLLGAIRRYDPSFGRSFEAFAVPTIIGEIKRFLRDKTWAIHVPRRIKELGPRIKS
TVEVLTRELQRSPQVWEIAEYLDVDEDDVLEAMEMGKSYQALSMDHSLEADSDGSTVTLF
DVVGQEDDGYEKADQRMLVANAMNVLSEREKQIIQYTYIEQLSQKETGDKLGISQMHVSR
LQRKAIKKLQEAILAAGGVS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacgatctcatcctaatcagccgaccaaagagcaagtgcttgaatggattgag
gcttaccagaaaaacgaagacgaagaagcccaaacaatgctcgtcatgaattacaaacgg
cttgttgaatcgattgcacgcaaatattccaatggtaaatcttaccacgaagatattgca
caagtaggcatgcttgggcttcttggtgccatccggcgctacgatccttcttttggcaga
agttttgaagcctttgcagttccgacaatcatcggtgaaattaaacgattcctgcgggac
aaaacgtgggcgatccatgtgccgcgccgcatcaaggaattagggccgcgcatcaaatcg
acggttgaagtgctgacacgcgaactccaacgctcgccgcaagtatgggaaatcgccgag
tatttagatgttgatgaagacgatgtactggaagcaatggaaatgggcaagagctaccag
gctctttcaatggaccattctttggaagccgattcagatggcagtacagtaaccttattt
gacgttgtcgggcaagaagacgatggttacgaaaaagcggatcagcgcatgcttgtagcg
aatgcgatgaatgtgctttctgaacgggaaaagcagatcatccagtatacctacatagag
cagctgagccaaaaagaaactggagacaagctggggatttcccaaatgcatgtctcccgt
ctgcagcgcaaagcgattaagaaattacaagaagccattttggcagccggcggagtttcg
tag
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integrated database retrieval system
