Puccinia graminis: PGTG_00347
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Entry
PGTG_00347 CDS
T02226
Name
(RefSeq) small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
pgr
Puccinia graminis
Pathway
pgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PGTG_00347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgr03019
]
PGTG_00347
03041 Spliceosome [BR:
pgr03041
]
PGTG_00347
03032 DNA replication proteins [BR:
pgr03032
]
PGTG_00347
Messenger RNA biogenesis [BR:
pgr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
PGTG_00347
Spliceosome [BR:
pgr03041
]
Complex A
U1 snRNP components
Sm proteins
PGTG_00347
U2 snRNP components
PGTG_00347
Complex B
U1 snRNP components
PGTG_00347
U4/U6.U5 tri-snRNP components
PGTG_00347
Complex C
U2 snRNP components
PGTG_00347
DNA replication proteins [BR:
pgr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
PGTG_00347
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Gp7_FN3
Motif
Other DBs
NCBI-GeneID:
10528154
NCBI-ProteinID:
XP_003307397
UniProt:
E3JQK5
LinkDB
All DBs
AA seq
98 aa
AA seq
DB search
MSGRQQRVMVQPINVIFKHLQAGQLVHIWLYDNTEFRLEGKIIGFDEFMNVVLDNASEVW
VKSKKGTPHREAVEKGARVSLGRLLLKGENITLIEALK
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggacgacagcaacgagtgatggttcagcccatcaatgtcatcttcaaacatctc
caagctggccaattggttcacatctggttatacgataacaccgaattcagactggaagga
aagatcatcgggtttgacgaattcatgaatgtagtgctcgataacgcatcggaagtctgg
gtcaaatcgaagaaaggaacaccgcatcgagaagcagttgaaaagggagcacgagtatca
ctaggtcgattgctactgaagggagaaaatattactctgatcgaagcattgaaataa
DBGET
integrated database retrieval system
