Puccinia graminis: PGTG_00372
Help
Entry
PGTG_00372 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
pgr
Puccinia graminis
Pathway
pgr03082
ATP-dependent chromatin remodeling
pgr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PGTG_00372
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
PGTG_00372
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pgr01009
]
PGTG_00372
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgr03021
]
PGTG_00372
03036 Chromosome and associated proteins [BR:
pgr03036
]
PGTG_00372
Protein phosphatases and associated proteins [BR:
pgr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
PGTG_00372
Transcription machinery [BR:
pgr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
PGTG_00372
SWI/SNF complex
PGTG_00372
Chromosome and associated proteins [BR:
pgr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
PGTG_00372
PBAF complex
PGTG_00372
SWI/SNF complex
PGTG_00372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
10528227
NCBI-ProteinID:
XP_003307422
UniProt:
E3JQV4
LinkDB
All DBs
AA seq
1384 aa
AA seq
DB search
MPVDLDRAAAAGKRKTRPRLKLSKHDLKLISNTEEVLVPIRLEIEVEHWKLRDTFTWNLK
EPVVTPEQFAIHLCEDLILPIQHFSGPIVSAIKEQLEEYKLHENFEGHLASRTSLPEEEE
TIGDDMKMMEGTSHLPLDHKEPMADPQQQQKEEAWWAEWRERIMTIDETDQKPNTTDFLR
DVKRPKLDRPSTPRLTATQSSIRSRLMDNNDQDFRPEPAESISLSTDLRDDELRIPINLD
IISGNIHLTDRFEWEISELNNSPEEFVEVYANDLGLSGEFKTAIAHSIREQIETYVKSLA
LVEHINGYPVPNDELRYAFLQRVADPIRTGQVDDFTPFLNLLNAEELDRQEKEHDREARR
KRRQTRSRRGITLPDRESQRTVRSIVPIQGLKMVIPYQNENEDLIVPIQPVAEPFAIEES
AVEIPEPSEHPPKKHIPVTKEVQIPDSQLGTPNKATGSRVSRRLRGATADVASTGTPPKT
VESNPPVDKDDAPTPSNAGTPAPCPSNKKTNNKPDPSTTNIKPSKKPPPSGPRTRGGVDW
EALGLHDPMVDGVWHCSNCGCPDSIAVGRRKGLGGKDTLCGECGRYMHRYKRNRPTLYNT
SADYHTSLKLEADKAKQAIADQEIVRKDKNKTENQNLPGSLNSKKRKKEGRSSLLPKPEL
MRRSEDRAASVASSAKSAASRESSPEPSVRSANNGASEKPLSKKRSRIHGTSEAPPPATR
AQKGISKTMIIDSPEPGNSPDSNSPTNARSQSTSTSQPTKPARVSSRRSSTKKGSEKNED
GPDRPPGSKSPPAVGTRQESQKRKEPRSKDPSVKTKNGSKSPEEDQVKSQPPPGSRSGSF
SGSVGGGKDPRNVQRRSMTNGRVPPPIPSIPKFDPPAWMTAALSGINKVYPSDRVELIPK
PRRLDPGQPLVVAASDWRLKCTDCPGKLYTVGPGESFTNFDVHLKNRQHRQKVEQRVADA
TKKAQQQISPTGSSHSQPEISPTGTTNQQPSQSSSSTTFNAHQPQVSPTDGSQQLQISPS
DGSQQLHSHAGSQISPVENTHAGSHISPVENNSQLNGHNSRGPSEASPIVFDSQYQPMVS
MNSHLEGIPFENPGQSDGNGPTSSLPPITTTLAAAESTGQEEDSVPPVDSLGVDQELVEE
TSEGSANPPPAPSSLDGVAIQENNDSVGPSQSSKDGEEEEETGQSPIPAPGTAELLPDSQ
QSHPLPLPPISDQLPPSAAVGLPGLGAIRPELPARPMIGPDGPGPFSSSAYPSSGPTHSP
SPGLPAIRRPSMTLAGAPHHLGFPARPTPPPGLNNPPLLHHPAHLHYNRNNPSLIHGPIG
GGNGIGNLPGLSSSSSVSSTIVPSSTAAATGPAVASHPVPIRHPPPPPPPHTLVHPLPKK
PTFD
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgccagtcgacctcgatagggctgctgccgcgggtaaacgcaagactcgtcctcgtctc
aaactcagtaaacatgacctcaaacttatctccaacaccgaagaggtcctagttcccatc
agactcgaaatagaggtcgaacactggaaactcagggatacatttacttggaacctcaaa
gaaccggtcgtcactccagaacaatttgcaattcatctgtgtgaagatttgattctaccc
atccaacacttctctggcccgatcgtcagcgcgatcaaggaacagttagaagagtacaag
ctacacgaaaactttgaaggccatctggccagtcgaacaagccttcccgaggaagaggaa
acgatcggtgatgatatgaagatgatggagggaaccagtcatctcccactcgatcataaa
gaaccgatggccgatcctcagcaacagcaaaaagaagaggcctggtgggccgagtggagg
gagcgaatcatgaccatcgatgagacggaccagaaaccgaatacaacggacttcctgcgg
gatgtgaagcggcccaagctcgatcgcccatccacgcccaggctcacagccactcagtca
tcgatccgatcacggctgatggataataacgatcaagacttcaggcctgaacccgccgag
tccatctcactctctaccgacctcagagacgacgaactccggatccccatcaatctcgat
atcatctccggtaatatccatctcaccgatcgctttgaatgggaaattagcgaactcaat
aattcccccgaagagttcgtcgaggtttatgctaatgatttgggcctcagtggcgaattc
aagacagcgattgcccactccattcgtgaacagatcgaaacatatgtgaaatcattagcg
ctagtcgagcacatcaatggttatcccgtaccaaatgacgaactaagatatgcattccta
caaagagtcgccgatccgattcggacaggacaggtggacgactttacgcctttcctcaat
ctccttaatgctgaagagcttgatcgccaggagaaggaacacgatcgagaggcacgcagg
aagcgccgacagacccgtagtcgccgaggcatcaccttgcccgacagggaatcccaacga
accgttcgcagcatcgtacccatccaaggtctcaagatggtgatcccctatcagaacgag
aatgaagatttaatcgtacccatccaacctgttgctgaaccatttgccatagaggaatcg
gccgtcgaaatacctgagccatctgaacacccaccgaagaagcatatccccgttactaaa
gaagtacaaattcctgacagtcagttgggtacaccaaacaaagctactggcagtcgagtc
tctcgcaggttgcgcggtgcgactgctgacgttgcatcaactggcacacctcccaaaact
gtggagtcgaacccaccagtcgacaaggatgacgcgcctacgccaagcaatgctggtacg
cctgcgccttgtccatccaataaaaagaccaataacaaacccgatccttcaacaaccaac
atcaaaccctccaagaagccccctccttccggcccacgcacccgaggtggggttgattgg
gaggctctcggtctacatgatccgatggtcgacggtgtttggcactgcagtaattgcggc
tgtcctgactcaattgctgtaggtaggcggaaaggtttgggcggaaaagataccctttgt
ggcgaatgtgggagatacatgcatcgatataagagaaaccggcctaccctttacaatact
tcggccgactaccacacaagcctcaaactggaagctgataaagccaaacaagctattgct
gaccaagaaatcgttcgcaaggataagaacaaaactgagaaccaaaatcttccgggtagt
ctgaacagcaagaagcgcaagaaagaaggtcggagcagtttattacccaaaccggaactt
atgagacgcagtgaagatcgcgcggctagtgttgcgagtagcgccaagagtgctgcttct
agagagtcttctcctgagccatccgttcgctcagctaataacggggcctcagagaagcca
ctttccaaaaaacgttctcgcatccatggaacttcagaggcccctccacccgccacccga
gcccaaaaaggcatatccaagacgatgatcattgattcccccgagccaggcaactctccc
gactcgaactcaccaaccaacgccagatcgcaatctacatcgacctctcaacctaccaaa
ccagctcgcgttagtagccgtcggagcagcaccaagaaaggttctgagaagaatgaagat
ggtcccgaccgaccgccaggttcgaaatctccaccagcggttggaactcgacaggagagc
cagaagaggaaagagccccgatcgaaggacccatccgtgaaaaccaagaacgggagcaag
agtcctgaggaggatcaggtcaagtcacagcctcctcctggttctcgttccggttctttc
tcaggctcggttggtgggggcaaagacccgagaaacgtgcagcggcgttcgatgaccaac
gggcgggtcccgccgccgattccttcgattccaaaatttgaccctccagcttggatgacc
gctgctctcagtggtatcaataaagtatacccttctgatcgcgtcgagctaatccccaag
cccaggagacttgatcccggtcaaccccttgttgtcgctgcctccgattggaggctgaag
tgtaccgattgtcctggaaagctatatacagtcggtcccggcgaatccttcacaaacttt
gacgtgcacttgaaaaatcgacaacatcgacaaaaagtggaacagagagtggctgatgcc
accaagaaagcgcaacaacagatctcacctactggtagttcgcatagtcagcctgaaatc
tcaccgactggaaccacaaatcaacagccttcccaatcttcatcttccactactttcaat
gctcaccaaccccaagtctcgcccaccgacgggtcccaacaactccaaatatccccaagc
gacggtagtcagcaactgcactcacacgccggctcacaaatctcgccggttgaaaacaca
cacgctggctcacatatctcgccggttgagaacaacagtcagctgaacggtcacaattct
cgtggtccgtccgaagcctctccaattgtttttgattcacagtaccagcctatggtttcg
atgaacagtcatttggaaggcatcccatttgagaatccgggacagtctgacgggaatgga
ccaacgagctcgttaccgccgatcacgaccacccttgccgcggctgaatcgaccggtcaa
gaggaggacagtgtgcctccggttgactcgctcggtgttgatcaagagcttgttgaggaa
acctcggaggggtcggccaatccgcctcctgctccttcgtcactcgatggggttgcgatt
caggaaaacaacgactcggtggggcccagccagtcctcaaaggacggagaagaggaagag
gagacgggtcagtctccgataccggcgccgggtactgccgagcttcttccagactctcaa
cagagtcacccacttcctttgccgccgatctccgatcaactccctccatcggccgctgtt
gggctgccggggcttggagcgatccggcccgagcttccggccaggccgatgataggtccc
gatggaccgggcccgttctcctcctcggcctatccttcatccggcccgacacattctccc
tcccccggcctgcccgcaatccgacgaccttcaatgaccctcgccggagcgccacatcat
ctcggattccccgctcgcccaacccctcctcctggactcaacaatccaccgctccttcac
caccccgctcatctccattacaaccgtaataatcccagcctcatccatggcccaatcggc
ggcggtaacgggatcggtaatctgcctggcttgtcctcctcctcctccgtctcttctacc
attgttccatctagtactgctgccgctactggtcctgctgtggcttctcatcctgttcct
attcgtcatcctcctcctcctcctcctccacacactctcgttcatcctttgcctaaaaaa
cctacgtttgattga
DBGET
integrated database retrieval system