Puccinia graminis: PGTG_00662
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Entry
PGTG_00662 CDS
T02226
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
pgr
Puccinia graminis
Pathway
pgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PGTG_00662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgr03041
]
PGTG_00662
Spliceosome [BR:
pgr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
PGTG_00662
Complex C
U5 SnRNP specific factors
PGTG_00662
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
PROCT
Motif
Other DBs
NCBI-GeneID:
10528097
NCBI-ProteinID:
XP_003307712
UniProt:
E3JQS4
LinkDB
All DBs
AA seq
2384 aa
AA seq
DB search
MAQPPPSVPPNNNNLNHPLPVPPASSSSSFVPTPPHLAPHGLPAPPHLAGMPPVSYQEPA
QMTQEELDLKAKKWTQFQQRKYGDKQVKTSFVDTGKQEMPPEHVRKIIKDHGDLSNRKFR
TDKRVHLGALKYVPHAVMKLLENMPMPWEQVREVPVIYHITGAITFVNEVPKVIPPVYHA
QWASMWLSMRREKRDRRHFKRMRFPPFDDEEPPLDYGDNILDTEPLEAIQMDLDEEEDAP
VFDWFYDHKPLVKKYKGVQYVNGSSYKSWQLDLGMMSTLYRIGRNLLSDFIDNNYFYLFE
PKAFFTAKAMNMAIPGGARFEPLHRDAESYDDDWNEFNDINKVIIRQQIRTEYRVAFPHL
YNSRPRSVHIPKYHEVKNLFIRVEDPDLPTFYFDPIIHPISSRAVAPQNQGVSHEEEIFG
DADEDDFQLPDDLEPFLADKPIADDNTTSAIAMWWAPYPYNHRSGKTIRTLDVPLVKNWY
MEHCPPGMPVKVRVSYQKLLKNYVLNELHKRKPKPQSKKYLFRQLKNTKFFQTTRLDWVE
VGLQVCRQGYNMLNLLIHRKNLNYLHLDYNMNLKPVKTLTTKERKKSRFGNAFHLCREIL
RLTKLIVDCHVQYRLGNVDAFQLADGLQFTFAHVGQLTGMYRYKYKLMKQIRQCKDLKHL
IYYRFNTGAVGKGPGVGFWAPGWRVWLFFMRGIVPLLERWLGNLLARQFEGRNSKGVAKT
VTKQRVESHFDLELRAAVMHDILDMMPEGLKQNKSKTILQHLSEAWRCWKANIPWKVPGM
PTAVENIILRYVKSKADWWTSVAHYNRERIKRGATVDKTVSKKNLGRLTRLYLKAEQERQ
NSYLKDGPYVTAEEAVAIYSATVHWLESRKFAPIPFPPLNYKHDTKLLVLALEKLKEAYS
VQGRLNQNQREELALIEQAYDNPHETLSRIKRLLLTQRAFKEAGLEFFDTYDKLIPVYDI
EPIEKITDAYLDQFLYFEADKRGLFPAWIKPADTEPPPLLVYKWCQGINNLHEVWETADG
ECNVMLETQLSKPYEKMDLTLLNRLLRLIMDHNLADYITAKNNIVLTYKDMSHVNSYGLI
RGLQFSSFVFQFYGLVLDLLIMGLQRASEMAGPPSMPNNFLQYRDTSTEVRHPIRLYARY
VDKIHILFRFTAEESRDLIQRFLSANPDPNNENIIGYNSKRCWPRDCRMRLIKHDVNLGR
AVFWDIKNRLPRSLTTIEWVDTNASVYSKDNPQLLFSMSNFEVRILPKIRNVGEAFTLKD
GVWNLVNEATKERTAQAYLRVSDYGIDQFHNRIRQVLMASGSTTFSKIVNKWNTAIIGLM
TYYREAVIHTNEMLDLLVKSENKIQTRVKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMG
HILIPASDLRWSKQTDTGITHFRSGMSHEEDQLIPNLYRYIQPWSSEFEDSARVWSEYAM
KRKEANSQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDWKQYQLLKHN
PFWWTNQRHDGKLWQLNNYRVDVIAALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEE
SMKFKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKI
SLIQIFRAHLWQKIHESVVMDLCQVFDQELEALQIETVQKETIHPRKSYKMNSSCADILL
FSAYKWNMTRPSLLTDSKDVLDGTTSQKYWLDVQCRWGDFDSHDIERYTRSKFLDYSQDN
TSIYPSPTGLMIGIDLAYNLHSAYGHWFPGAKPLIQQAMAKIMKANPALYVLRERIRKGL
QLYSSEPTEPYLNSQNYSELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFN
PRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQVIVTRKGMLDP
LEVHLLDFPNIVIKGSELQLPFQSAMKLEKFGDLILRATQPQMILANLFDDWLKSISSYT
AFSRLILLLRALHVNQEKSKIILRPNKSTITQPHHVWPTLSDEEWMRVELALRDLILADY
AKRNAVNTASLTSSEIRDIILGMEIQAPSIQRQQMAEIEKTAEQANQVTATQTQTTNVHG
DLIQVVTTTQYETQTFSSKTDWRIRAISSTNLPLRLQHCYVQNDDVSDSLPTFVLAKNIM
KSFVCAADLRTPIAAILYGQAAPDNNRVIEVRAVAVIPQRASQRSIELPNALPKHPLLDD
MKIVGVIHTQAQESQTLSPNDAILFSKLMAQHSQLDGTSIMLTVAFTPGSLSLSAYVLTP
KGFEWGRNADPNAPNGYNPASMSERVQLLLSDRILGSTFVPQDGIWNYSVGLGPRFQTTM
EYTMTLAGQPIPFWDPSHRPNHFSAFQNIAVEEEPTIDTADPFA
NT seq
7155 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaccaccgccttctgttcctcccaataataacaatctcaaccatccattaccc
gtaccaccagcctcctcttcatcctcttttgtgccgactccacctcatcttgcaccacat
ggacttcctgctccccctcatctggctggaatgcctccagtctcatatcaagaacctgct
caaatgacccaggaagagttggatctcaaagctaagaagtggacccagtttcaacagcgt
aaatatggcgataaacaagtcaagacgagctttgttgatactggcaaacaagaaatgcca
cccgaacatgtccgcaaaatcatcaaggaccatggtgatttgtcaaatcgcaagttccgg
accgacaagcgagttcacttgggtgctctcaaatatgttccacatgccgttatgaagctt
ctcgaaaatatgcccatgccgtgggagcaggttcgggaggttcctgtcatctaccacatc
actggtgccattacctttgtcaatgaagtcccaaaagtcatcccacctgtctatcacgca
caatgggcttcaatgtggctatcgatgcgacgagaaaagagagatcgacgtcacttcaag
cgaatgcgtttccctccgtttgacgacgaagagcccccgctagattatggcgacaacatt
cttgacacggaaccacttgaagctattcagatggacttggacgaagaagaagacgcgcca
gtgttcgattggttctacgatcacaaaccccttgtcaagaagtacaagggtgttcaatac
gtcaatggctcgagctataagtcctggcagcttgacttgggaatgatgagcacgctgtat
cgaatcgggagaaatttacttagtgatttcatcgacaacaactacttctatctctttgaa
cccaaggcgtttttcaccgcgaaggccatgaacatggctatccccggaggtgcccgtttc
gagccgttgcaccgtgatgctgaatcatacgatgacgattggaacgagtttaacgacatc
aacaaggttatcatccgccaacagatccggactgaatatcgagtagcatttccccacctt
tacaactccaggccccgtagcgttcacatccccaagtaccacgaagtcaaaaatctgttc
attagagtcgaagatccagacctccccactttttattttgatcctatcatccatccaatc
tcttcccgcgctgtggctccacaaaaccagggagtctcacatgaggaggaaatcttcggt
gatgcagacgaggatgacttccagcttcccgacgaccttgagccgttcctggctgataaa
ccaattgcggatgataacaccacttcggcaatagccatgtggtgggccccttatccgtac
aatcatcgcagcggaaaaacgatcaggactctggatgttccccttgtcaagaattggtac
atggagcattgtcccccaggaatgcccgtgaaagttcgagtctcataccaaaaattgttg
aaaaactacgttctgaacgagttgcacaaaagaaagcccaaacctcaatcgaaaaagtat
ctattccggcagttgaagaataccaagttctttcaaactactcggctggattgggtcgag
gtaggattgcaagtttgtcggcaaggttacaacatgttaaatttgttgatccaccgtaaa
aacctcaactacttgcatctcgactacaacatgaatctaaagcctgttaagactcttacc
accaaggaacgaaagaagtcacgattcggaaatgcattccatttatgccgagaaattctt
cgattgactaaattgatagtcgattgtcacgttcaataccgtctaggaaatgtggatgcg
ttccaattggcagatggtttacagttcacgtttgcacatgttggccaactgacgggaatg
tatcgatacaaatacaaattgatgaagcaaatccgacaatgtaaagacttgaaacatttg
atctattatcgtttcaatactggtgccgtcggaaaaggtcctggtgtcggattctgggcc
ccgggttggagggtttggttgttcttcatgcgtgggatcgtccctctcttggagcgttgg
ctcggaaatttgctcgctagacagtttgaaggtcgaaatagtaaaggcgtggctaaaaca
gtgactaaacaacgtgttgaaagtcatttcgacttggaattacgtgcagcagtcatgcat
gatatattggacatgatgccggaaggattgaaacaaaacaagtctaaaaccatcttgcag
catttgtcagaggcctggcgatgttggaaggcgaacataccttggaaagtacccgggatg
cccacagcggttgagaacatcatattgagatatgtcaagtcgaaggccgattggtggaca
tccgtcgcgcattacaaccgagagcgaatcaaacgtggagcaacggtcgataaaactgtc
agcaagaaaaacttgggcagattgactcgactgtacctcaaggcggagcaagaaagacag
aacagttatctcaaagatggtccttatgttactgctgaagaggccgtagccatctattcg
gctaccgtccactggctcgagagtcggaagtttgcaccgattccgttccccccgctgaac
tacaagcacgataccaagctgctggtcttggccctcgaaaaactcaaagaggcgtattcg
gttcaaggccgactcaatcaaaaccaaagagaagagcttgcattgattgagcaggcttat
gataatcctcacgagaccctttcccgaatcaaaaggttgctcttgactcaaagagccttc
aaagaagcaggactcgagttttttgatacatacgacaagttgattcctgtttatgacatc
gaacctatcgagaaaattacggacgcatacttggatcaatttctgtattttgaggccgat
aagcgcggcttgtttcctgcctggatcaaacctgccgatactgagccgcctccgttactc
gtgtataaatggtgtcaaggaattaacaacttgcacgaagtatgggagactgctgatggc
gaatgtaacgtgatgctcgaaactcaattgtcgaaaccctacgaaaagatggatttaacg
ttattgaacagattgctaagattgatcatggatcacaatctggctgattacatcactgcc
aagaataacatcgttctgacctataaagatatgagtcatgttaactcttatggactgatc
agagggttacaattctcgagctttgtgttccagttctacggattggttttggatttgtta
atcatgggcttacaacgggccagtgaaatggccggacccccatccatgcctaacaatttc
cttcaataccgagatacttctaccgaggttcgacacccgatcagactctatgctcgatat
gtcgataagattcatatcttattccggtttactgctgaggaatctcgagacctgatccag
agatttttgtctgccaatcctgatccaaacaatgaaaacatcattggatacaactctaaa
cgatgttggccgcgtgattgtcgtatgaggttgatcaaacacgacgttaaccttgggaga
gcggtattctgggatatcaagaatcgtcttcctcgttcactcaccactatcgaatgggtt
gatacaaatgctagtgtctattctaaggacaaccctcaattactcttcagtatgagcaac
tttgaggttcgaattcttcctaagatccggaatgttggcgaagcgtttaccttgaaggat
ggcgtgtggaacttggtcaatgaagcgactaaagagaggactgctcaggcttatctccgg
gttagcgattatggtatcgatcagttccataatcgaatccgacaagtcttgatggcttct
ggatcaaccaccttcagtaagatcgtgaacaagtggaatacagcgatcatcggattgatg
acatactatcgagaagcggtaatccataccaacgaaatgttagatctccttgtgaaaagt
gaaaacaagattcaaacgcgtgtcaagatcgggttgaattccaagatgccttctcgattc
ccgccggtcgtattctacacaccaaaggaactgggtggattaggcatgttgtccatggga
cacatcttgatcccggcatctgatctccgatggtcgaagcagacggacacgggcatcact
cactttaggagtggaatgagccacgaggaagatcagttgatccccaacttgtatcgatac
attcaaccgtggtcatccgaatttgaggattctgcgcgagtctggtcggaatacgcgatg
aagaggaaagaagcaaactctcagaataggcgactgaccttggaagatctggaagacagt
tgggaccgaggtatccccagaatcaataccttgttccaaaaggatcgacatacgttggcc
tacgacaagggttggagagttcggacggattggaaacagtaccaactattgaagcacaat
ccgttttggtggaccaaccaaaggcacgatggaaagttatggcagttgaacaactatcga
gttgatgtcatcgcagccttgggtggtgttgaaggcatcctagagcacactctgttcaaa
ggaacttatttccccacttgggaggggctcttctgggaaaaagcctctggattcgaagag
tctatgaaattcaagaaacttaccaacgcccagcgatctggtttgaaccaaatccccaat
cgtcgattcactctgtggtggtcgccgactatcaatcgtgcaaacgtctatgtgggattc
caagttcaactcgatctgactggaattttcatgcacggaaagattcctaccctcaagatc
tctctgattcaaattttcagagcacatttgtggcaaaagattcacgaatcggttgtcatg
gatctttgccaagtctttgatcaagagttggaagccctccagattgagaccgtgcagaag
gagacgatccatccacgtaaaagttacaagatgaatagctcttgtgctgatatcttgttg
tttagcgcttataagtggaacatgacgaggccatctttgttgaccgattccaaagacgtt
ttggatggaacgactagtcagaagtattggctcgatgtgcaatgccgttggggagacttc
gattcacatgatattgagcgatacactcgatctaaattcttggattattctcaagacaat
acgtcgatctatccatcaccgacaggtctgatgatcgggattgatctagcctataacttg
cattcggcgtatggacattggttcccgggagctaagcctttgatccagcaagccatggct
aagataatgaaagccaacccagccctctatgttttacgagaacgaatccggaaaggtctt
cagctttactcctccgaaccaactgagccgtacttgaactctcagaactattcggagctg
ttctctaaccaaatcatttggttcgtcgatgataccaacgtataccgagtcacaatccac
aagacattcgaaggaaatttgaccaccaaacctatcaacggtgccatttttatcttcaat
cctcgtaccggacagttgttcttgaaaattattcatacctccgtctgggctggtcaaaaa
cgactggggcaattagcgaagtggaaaactgctgaagaagtggcagctttgattcgttct
ctaccggtagaagaacagccaaaacaggttatcgtgactcggaaaggaatgttagaccct
ctcgaagttcatttgctcgatttccccaacatcgtcatcaaaggtagcgagctgcagtta
cccttccaatcagccatgaagctcgaaaagttcggagatttgatccttcgagcaactcag
ccacaaatgattctagccaatctgttcgatgattggcttaaatcaatctcctcctatacc
gcattctctcgtttgatcctactgttgcgggctttgcacgtcaaccaagagaaatcgaag
attatcttgaggccgaacaagtcgaccatcacccagccgcatcacgtttggccaactctc
tcagatgaagaatggatgagagtcgaattggctctccgggacctaatcttggctgattat
gctaagcgtaacgccgtgaatacggcttcattgactagttctgaaattcgggatatcatt
ttgggtatggagatccaagctccatcaattcagagacagcagatggccgagatcgaaaag
accgctgaacaagccaatcaagtgaccgccactcaaacccaaactaccaatgttcacggt
gatttgattcaagtggtgacgactacccagtacgaaacacaaacattttcgtcgaagact
gactggcgcatccgagcgatcagttcgacgaaccttccgctgcgattgcagcattgttat
gtgcagaacgatgatgtgtcggattccttgccgaccttcgtcctcgccaagaacatcatg
aagtctttcgtgtgcgctgccgatctcaggacgcctatcgccgcgattctctacggtcaa
gcagcgccggacaataaccgagtgattgaagttcgagcggtagcggtgatcccacaacga
gcgagtcaacggtcgatcgagttgccaaatgccttgcccaagcatccgctcttggacgac
atgaagattgtcggggtgatccacacccaagcacaagagtcgcagaccttatctccaaac
gatgcaatcttattctccaaactgatggcccaacactctcagttggacggcactagcatc
atgttgaccgtcgctttcacccccggttccctctccctctccgcttacgtcctcacccct
aaaggcttcgagtggggtagaaacgctgatcccaatgctcctaacggatataaccctgct
agcatgtctgaacgtgttcagttgttgttgagtgatcgtatcttggggtctacattcgta
ccacaagatggaatctggaactactcggtgggtcttggaccaaggttccaaacgacgatg
gaatacacaatgaccttggccggccagccgattcctttctgggacccaagtcaccgaccg
aaccatttcagcgccttccaaaacatcgctgtcgaggaggagccgactattgacactgcg
gatccgttcgcatga
DBGET
integrated database retrieval system
