Puccinia graminis: PGTG_01720
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Entry
PGTG_01720 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K12883
nuclear cap-binding protein subunit 2
Organism
pgr
Puccinia graminis
Pathway
pgr03013
Nucleocytoplasmic transport
pgr03015
mRNA surveillance pathway
pgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PGTG_01720
09122 Translation
03013 Nucleocytoplasmic transport
PGTG_01720
03015 mRNA surveillance pathway
PGTG_01720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgr03019
]
PGTG_01720
03041 Spliceosome [BR:
pgr03041
]
PGTG_01720
Messenger RNA biogenesis [BR:
pgr03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
PGTG_01720
Spliceosome [BR:
pgr03041
]
Common components
Common spliceosomal components
Cap binding complex
PGTG_01720
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DUF3602
Motif
Other DBs
NCBI-GeneID:
10547569
NCBI-ProteinID:
XP_003319546
UniProt:
E3JSV2
LinkDB
All DBs
AA seq
196 aa
AA seq
DB search
MAHVCQNLDSYSSYRDSRSPLSYEDQQLQLSRSSTVYVGNLSFFTTEEQIFELFSKAALI
KRIIMGLDRNSKTPCGFCFVEYYRPEDALACLRYISGTKLDERVIRADLDPGYLDGRQYG
RGKSGGQVRDEYREDYDVGRGGWGHLKQKQEERQRQMRQDEMYRDDHDGGGNREVPDGAG
EGGPRFREDQAEEDAD
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggcacacgtctgtcagaatttggactcttattcttcataccgtgattcaaggtcaccg
ttatcgtacgaagatcaacaacttcaactatctcgctcgtcgacagtctacgtggggaac
ttatcattctttacgaccgaagaacaaatctttgagctattctccaaagccgcactcatc
aaacggatcatcatgggactcgatcggaactctaaaacgccctgtggattctgcttcgtc
gagtattatcgaccagaagatgcattggcttgtttgagatacatctccggtaccaagctc
gatgaacgggtgattcgtgcagacctggacccgggctatctggatggccgacagtatgga
aggggaaagagcggtggccaggtacgcgatgaatatcgggaagattacgatgtcggacga
ggtgggtgggggcacttgaaacaaaaacaggaagaacggcagcgtcagatgaggcaggat
gagatgtatcgtgacgaccatgatggcggtgggaatcgtgaggttcccgatggggctggt
gaagggggccctcggtttcgagaagaccaagcagaggaagacgcagattga
DBGET
integrated database retrieval system
