Puccinia graminis: PGTG_02128
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Entry
PGTG_02128 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
pgr
Puccinia graminis
Pathway
pgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PGTG_02128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgr03019
]
PGTG_02128
03036 Chromosome and associated proteins [BR:
pgr03036
]
PGTG_02128
Enzymes [BR:
pgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PGTG_02128
Messenger RNA biogenesis [BR:
pgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
PGTG_02128
mRNA degradation factors
5'-3' decay
Decapping complex
PGTG_02128
Chromosome and associated proteins [BR:
pgr03036
]
Eukaryotic type
Gene silencing
piRNA pathway
PGTG_02128
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
10528606
NCBI-ProteinID:
XP_003321086
UniProt:
E3JX92
LinkDB
All DBs
AA seq
407 aa
AA seq
DB search
MVTTGGTTLKDDILRRQEAVHVVVGTPGRILDLASKGVADLSQCKTFVMDEADKLLSPEF
TVVIEQLLSFLHKDRQVMLFSATFPMIVKDFKDKHMIKPYEINLMEELTLQGVTQYYAFL
EERQKVHCLNTLFSKLQINQAIIFCNSTNRVELLARKITDIGYSCFYSHAKMLQQHRNRV
FHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHRGIAIN
LITYENRFDLYRIEQELGTEIQPIPAVIDKALYVAPGIEDTPSSTPTHGGSSVSTSNAHQ
ATHPNQSQQSNQAHRNGRQTNHQPSDQSHVPQPHDKPTLPPQQLTFQKAAPIDSLSHATP
TEYANGAPPPNSSRVNNHKSTRGGNGGPHRGRGGGAHRAPSGIAPAA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggtcacaacaggtggcacaactttaaaagacgacatcctccgtcgacaagaagctgta
cacgttgttgtcggcacgcccgggcgaattctcgacctcgccagtaagggtgttgctgac
ctcagccaatgcaaaacgtttgttatggacgaagccgacaagcttctcagcccagaattc
acagttgttatcgaacagctgttatcatttttgcacaaggatcgtcaagtcatgctcttt
tcagctacttttccaatgattgtcaaggatttcaaagacaaacacatgatcaagccttac
gaaattaacttgatggaagaactcacacttcaaggtgtcactcaatactacgctttcctg
gaagagcgccaaaaagtgcattgtctcaacacgctattctccaaattgcaaattaatcag
gccatcattttttgtaactcgaccaatcgagtcgaacttcttgctcgtaaaatcacggac
attggctattcttgtttctactcacacgccaaaatgctccaacagcatcgtaatcgagtc
tttcacgactttagaaatggggtttgccgtaaccttgtatgctccgatctcctcacaaga
ggtatagatattcaggcggtcaatgtcgttatcaatttcgatttccccaaaaacgctgag
acatacctacatcgtattggtcgatcaggaaggtttggccatcgcggaatagcgatcaac
ttgatcacatatgagaatcgatttgatctgtatcgcatagaacaagagcttggaacagag
attcagccgatacccgctgtgatcgacaaagctctctatgttgcacctgggattgaagac
accccttcaagcacaccgacacacggcggctcctccgtgtccacttccaatgctcaccaa
gccactcatccgaatcagagccagcaatctaatcaggctcaccggaatggacgtcagacc
aatcaccaaccttctgaccagtcgcacgtgccacaaccgcatgacaaacccactctgccc
cctcagcaattgacctttcaaaaagctgcacctatagactcgttgtctcacgcaacaccc
accgaatatgccaatggggcaccaccaccaaacagttcacgtgtgaataatcacaagtcg
actcgtggaggtaatggtggcccacatcgaggcaggggtggcggggcccatcgagcgccg
agcggaatcgctccggcagcttga
DBGET
integrated database retrieval system
