Puccinia graminis: PGTG_02295
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Entry
PGTG_02295 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pgr
Puccinia graminis
Pathway
pgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PGTG_02295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgr03041
]
PGTG_02295
03009 Ribosome biogenesis [BR:
pgr03009
]
PGTG_02295
Enzymes [BR:
pgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PGTG_02295
Spliceosome [BR:
pgr03041
]
Complex A
U1 snRNP components
U1 related factors
PGTG_02295
Complex B
PGTG_02295
Ribosome biogenesis [BR:
pgr03009
]
Eukaryotic type
Pre-60S particles
Helicases
PGTG_02295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF2443
P-loop_SecA
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
10528938
NCBI-ProteinID:
XP_003321253
UniProt:
E3JXQ9
LinkDB
All DBs
AA seq
546 aa
AA seq
DB search
MSYGGHYGGGGSSSGYGGGYSGGYGGGGGGGGGYGGGGGYGGGGGGGGDRMSGLGSGLGR
PKWDNSTLTKFEKNFYVEDPRITSRSERDINQFRAEKEIQVFGKNIPKPISNFSEAGFPD
YIMSEIRNAGFNAPSPIQCQAWPMALSGRDVVAVSATGSGKTIAFSIPAMIHINAQPLLA
PGDGPIVLILAPTRELAVQIQGECTKFGASSRIRNTCVYGGVPKGQQIRDLTRGAEIVIA
TPGRLIDMLESRKTNLHRVTYLVMDEADRMLDMGFEPQIKKIVEQIRPDRQTLMFSATWP
KEVQRLASEYLKDFIQVNVGSLDLTANINITQIVEVCSDFEKRGKLIKHLEKISSESAKV
LIFVGTKRVADDLTKYLRQDGWPSLAIHGDKQQQERDWVLEEFKSGRSPIMIATDVASRG
LDVKDIAYVINYDMPNGIEDYIHRIGRTGRAGRTGTAYSYISADQSKLARELVKILRDAK
QIVPSALVEMASIGGGGGGGRRGGGGYGGGRGGGGGGGRYGGGGSGANSYGMGRGGGGGG
GGGSRW
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacggtggtcattacggaggaggaggtagctcaagcggctatggaggtggatat
tctggcggctatggtggaggtggtggtggtggtggaggctacggcggcggcggaggctac
ggcggcgggggtggtggtggaggcgaccgaatgtcaggcctcggcagtggcttgggacgc
cctaaatgggacaactcaaccttgaccaagttcgagaaaaacttctacgttgaagaccct
cgaattacttctcgttccgagcgtgacatcaatcaatttcgcgccgagaaagagattcag
gtgtttggcaaaaacatccccaagcccatctcgaatttcagcgaggctggattcccagac
tacatcatgagtgagattcgcaacgccgggttcaacgctccaagccctattcaatgccaa
gcttggcctatggccctcagtggtcgcgatgtagtggctgtcagtgccactggatcgggt
aagactatcgcgttttcgatcccggccatgattcacatcaatgcccaacctcttctagca
ccgggcgacgggcccatcgttttgattcttgccccgactcgtgagctggccgtgcaaatt
caaggcgaatgtaccaagttcggcgcctcgtcccgcattcgcaacacgtgtgtttacgga
ggtgttcccaaaggtcaacagatccgtgacctcactcgcggagccgagattgtcatcgct
actcctggtcgtctgatcgatatgctcgagagtcgcaaaacaaacttgcatcgagtcact
tatcttgtcatggacgaggcggaccgaatgctcgacatgggtttcgagcctcagatcaag
aagatcgttgaacaaattcgacccgatcgacagaccttgatgttttcagctacttggccc
aaggaggtccaacgattggctagtgaatatctgaaggatttcattcaagtcaacgttgga
agtctagatcttactgccaacatcaacatcactcaaattgtagaggtgtgcagtgatttc
gagaagagaggcaaactgatcaagcatctcgagaaaatctcgtcggaatccgccaaagta
ctcatctttgtcggaacaaagcgagttgccgacgatctgacgaaatatctgcgtcaagat
ggatggccgtcacttgcgattcatggtgacaagcaacagcaagaacgtgattgggtactc
gaggagttcaagagcggccgaagtcctatcatgatcgccaccgatgtcgcttcgcgtggt
ctagacgtcaaagacatcgcttatgtcatcaattatgacatgcccaacggcattgaagac
tacattcatcgtatcggtcgaaccgggcgtgctgggcgtacaggtactgcctacagctat
atcagtgctgatcagagcaagctggccagggaattggtcaagattcttagagacgccaag
caaatagtcccgtcagcattggtagaaatggcatccatcggaggaggcggtggtggtgga
cgccgaggaggtggtggctatggtggtggccgtggtggaggcggtggtggtggcagatac
ggcggaggaggttcgggtgcgaactcttacggtatgggacgcggaggtgggggtggtggt
ggtggtggttcgcggtggtag
DBGET
integrated database retrieval system
