Puccinia graminis: PGTG_02339
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Entry
PGTG_02339 CDS
T02226
Name
(RefSeq) histone deacetylase 1/2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pgr
Puccinia graminis
Pathway
pgr03082
ATP-dependent chromatin remodeling
pgr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PGTG_02339
03083 Polycomb repressive complex
PGTG_02339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgr03036
]
PGTG_02339
Enzymes [BR:
pgr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
PGTG_02339
Chromosome and associated proteins [BR:
pgr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
PGTG_02339
HDAC complexes
Sin3A-HDAC complex
PGTG_02339
BRAF-HDAC complex
PGTG_02339
REST complex
PGTG_02339
SHIP complex
PGTG_02339
MiDAC complex
PGTG_02339
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
PGTG_02339
Heterochromatin formation proteins
Other heterochromatin formation proteins
PGTG_02339
Chromatin remodeling factors
NuRD complex
PGTG_02339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
10529063
NCBI-ProteinID:
XP_003321297
UniProt:
E3JXV3
LinkDB
All DBs
AA seq
632 aa
AA seq
DB search
MSGNMIPIAGEDKKRICYFFDSDIGNYHYGPGHPMKPHRIRMTHALVMNYGLYKKMEIFR
AKPATRKEMAQFHTDDYVDFLSKVTPDNMEEFAKEQAKFNLGDDCPVFDGLFEYCSISAG
GSMEGAARLSRDKCDIAVNWAGGLHHAKKAEANGFCYVNDIVLGILELLRYHKRVLYVDI
DVHHGDGVEEAFYTTDRVMTCSFHKYGEFFPGTGELRDTGHGKGKHYAVNFPLRDGITDE
AYKNIFEPVIMKIMETYQPSAIVLQCGGDSLSGDRLGSFNVSMRGHANCVRFIKSLGLPL
LLLGGGGYTIRNVSRTWAYETGLAAGQELCTDIPMNEYYEYFGPTYRLDVPPSNMEDMNV
VKYLEKTKIQIFENLRHTIPVPSVGLQAIPRLAHDEMDVDEDLDDPNERRPQRLLDGLIQ
RDDEFSDSEDEGEGGRRDIQSHKRARRQSPKMNGNGILSIHSGIQNSFSQSRHSADLHFN
RPSSSHNSSLSVDTPDPPIVTPTPDPTIAAPTPDPPVTAPAPDPPITQPAPDLVVGPEPG
PSALRPTLDPPTVGPIANPHVVPLVPDPRVVTPVAAQPVVVPVEVPPVVVPVAATPIVAP
TPTTALVDIPMLSQVDQMELEKLTSEAFNAQI
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtaatatgataccgatcgctggcgaggataaaaaacgaatctgttatttcttc
gattcggacattggaaattatcattatggccctggtcaccccatgaaaccccatcgaatt
cgaatgacacacgctctggtgatgaactacggactatacaaaaaaatggagatctttagg
gcgaaacctgcaacccgcaaggagatggcacaatttcatacggatgattacgtggatttc
ctgagcaaagtgacccctgacaacatggaagaattcgcgaaggaacaagctaaattcaat
ttgggcgacgattgtcctgtatttgatggactgtttgaatattgctcgatatccgctggt
ggctcgatggagggagctgcgaggttatccagggataaatgtgatatagcggttaactgg
gcgggtggtctccatcacgcaaagaaagccgaagctaacggcttctgttatgtcaatgac
attgtattgggtatcctcgagcttcttcgctaccacaaacgcgtactctatgttgatata
gatgtgcatcatggtgacggagtggaagaggctttctacacgaccgaccgagtgatgaca
tgtagttttcataaatacggtgaattctttcctggtacaggtgaactacgtgatactggg
cacggaaaggggaagcactatgccgtcaattttcctctgagggatggtatcaccgatgag
gcgtacaaaaacatctttgaaccagtcattatgaaaatcatggagacatatcagccttca
gccatcgtgcttcaatgtggtggagattcattatcaggagaccgcttaggaagtttcaat
gtatcaatgcgaggacatgccaattgcgttcgattcattaaatctttgggactgccttta
cttcttctgggtggaggaggttacacaattcggaatgtatcaaggacgtgggcctacgaa
accggacttgcagcgggacaagagctgtgtacagatattccaatgaatgaatactatgaa
tactttggccccacttatcgcctagatgtaccaccctccaacatggaggacatgaacgtg
gtcaagtatttggaaaagactaagattcagatttttgaaaatttgcgacacacgattccc
gttccatcagttggcctgcaagctattcccaggctggctcacgatgagatggatgttgat
gaggatctggacgatcccaatgagcgtagacctcagcggctactggatggattgatacaa
cgagacgatgagttttctgatagtgaggacgagggcgaaggcgggcgacgtgatattcag
tctcacaaacgggcacggagacagtctcccaaaatgaatgggaatgggatccttagcatt
cactctggaatccaaaattcattttctcaatctcgacattcagctgacctccatttcaac
cggccgagctctagtcacaattcttctctatcggtagacacaccggaccctcctattgtc
acaccaacaccggatccaaccattgccgcgccaacaccggatccacctgttactgcgcca
gcgccagacccacctatcacccagccagcaccagacttagttgtcgggccagaaccgggc
ccctccgctctccggccaactctagacccacctactgtcgggccaatagccaacccacat
gttgttccactagtaccagatccacgtgttgtcacaccagtagcagctcaacctgtcgtc
gtgccagtagaagttccacctgtcgtcgtgccagtagcagctacacctattgttgcgcca
acaccaacaacagctttggttgatatcccaatgctctctcaagtcgaccaaatggagctt
gaaaaactgacttccgaagctttcaacgctcagatttga
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integrated database retrieval system
