Puccinia graminis: PGTG_02400
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Entry
PGTG_02400 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K27407
RNA-binding protein VTS1
Organism
pgr
Puccinia graminis
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgr03019
]
PGTG_02400
04131 Membrane trafficking [BR:
pgr04131
]
PGTG_02400
Messenger RNA biogenesis [BR:
pgr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
PGTG_02400
Membrane trafficking [BR:
pgr04131
]
SNARE
SNARE associated proteins
Others
PGTG_02400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
SAM_1
SAM_Ribosomal_mS41
Motif
Other DBs
NCBI-GeneID:
10529206
NCBI-ProteinID:
XP_003321358
UniProt:
E3JY14
LinkDB
All DBs
AA seq
982 aa
AA seq
DB search
MQRRPLEEVEAVQSVWIYRFRLGGVEARLCSVYNWWPSRLGSDWLSGLVFSVGVAYVSVL
RRLASRIIDDPDSLHSSHSELASAIEKTIRSSTSTSTVPCLITTRPFFFFFLFSSSLTPT
SSPSSSNLRQPVYTTQRQHQAQPSQFDSMASLAPVRPPSATSNRSPTPSSQQHNNVFRHQ
HSLSSSTPSNQHFGALSPRYGPPRSAGGMRQSLDNTKQSIGNPPVSPRLPPGSAGHNIRP
NSEMLGLSGQQQLHGGPSLEAEAIDKWFEDLQSYEATLEEMATASLDASFKEELSAIEQW
FRVLSEAERTAALYSLLQSSTQVQIRFFITVLQQMARSDPMTALLSPAPTGNGVSMKQQM
EAKLAQLSKMSPASPIVRQFARQSLGPNTSSNEPYLSPNSALLSDSNNFNTSPNDAAALL
ASQRAKLQSKAANRVSAPGQLLGDSSLKSPKWSNFSGPVEEEAQSRSVSPRPKSTSSELN
STSSNQHNPPAPTLSRTLPSPCSGQESQMSPAVGGSWASQVNTPLVPMFANKDSAHNHHE
THQAHGEAVANRLAQWGATHQAGSNSASLPASALAPSKARGSVDAPPTGIQLDDARKFRR
ASKSNATNASSGFSGVLSGMNSSTNSTSSSAQAPNRSGNNNPANGQSGMLSRTMPATNNT
SNAHLTSAMSSSSGPSLPGLMSAQSLLGAPQTAMAAAQQNWRNGLNSPNTQSLNSPDPTM
VNNLAMMNTLAGLNGGMDMNSMANLAAMANMTDPNALQNMANILNMRQQIQQVQSIQALQ
QQLQQNGMIAGMMNAAPLLSPANNGRFGMNMGFPINGGAGAGGGAGAGMAGNKRSPGIGA
RPAAAANKPNHTPGSGANPEEELDMKLLGDVSAWLRGLRLHKYTPNFEGCTWKEMVMMSD
SDLENRGVAAVGARRKMLRTFETVRLKTGMALPGDGDGARDANGDRIESATGNVDKVEDE
DRPTSQHQQPTSNVSVTPESDQ
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggaggccacttgaagaggtggaggctgttcagtctgtatggatatataggttt
cgtctcggtggagttgaggcgaggctatgttctgtgtacaactggtggccgtccagactg
ggttcagattggctgagtgggctggtttttagtgttggagtggcttatgtgagtgtgctc
cgtagactggccagtcggataatcgacgatccagactcacttcacagctctcactccgaa
cttgcctctgcaatcgagaaaaccatccggagttcaacttcaacttcaaccgtcccctgt
ctcatcacaacccgccccttcttcttcttcttcctcttctcctcatccctcactcccaca
tcttctccttcttcttccaacttgagacaaccagtctacacaacacaacgacaacatcaa
gcacaaccctctcaattcgactcgatggcttcattggctccagttcgaccaccctctgct
acttccaaccgatcacccaccccttcatctcaacagcacaacaacgtcttccgtcatcag
cactctctctcctcatccaccccttccaaccaacacttcggagccctctccccccgctat
ggcccccctcgaagtgctggcgggatgaggcagagcttggacaacaccaaacagtccatc
ggcaacccccctgtcagcccccgtctgcctcctggatccgctggtcacaacatccgtccg
aatagtgagatgctcggattgagtggtcaacagcaactccacggtggaccctccctagaa
gccgaagccatcgataagtggttcgaggatctacaaagctacgaagcaacgctcgaagaa
atggccacagctagtttggatgctagcttcaaggaagagttgagtgcgatcgagcaatgg
ttccgagttctaagtgaggccgaaagaactgctgccctatactctttgttacaatcctcc
acccaagttcaaatacgattcttcatcacggtcttacaacaaatggcccgcagtgacccg
atgactgccctgttaagccccgctcctacgggtaatggagtctccatgaagcaacaaatg
gaagccaaactggcccaactaagcaagatgtcacctgcgtcgccaattgtccgacaattt
gctcgtcaatcacttggccccaacacttcatccaacgagccataccttagtcccaactct
gcactcctcagtgattccaataattttaacaccagcccaaacgatgcagcagctttactc
gctagtcaacgtgcaaaactgcagtccaaagcagctaatcgtgtttctgcccctggtcag
ctcctaggagatagtagcctgaagagccccaagtggagcaatttttcaggtccagtggaa
gaagaggcgcagagtcgctcggtaagccctagacccaagagcactagcagcgaactcaac
tctacctcctccaaccaacacaatcctcctgcacctacgctttctcgtactttgccttct
ccctgttcggggcaagagagtcagatgagcccggccgtcgggggtagctgggccagtcaa
gtcaacacccctctagtccccatgtttgctaacaaggactcagctcacaaccatcatgaa
actcatcaggctcatggcgaggctgtggcgaaccgtctggcccaatggggtgccactcac
caagccggctcgaatagtgcctccttacccgcttctgcattggctccctcgaaggcacgt
ggctcagtggacgccccaccaactggcattcaattagatgacgcacgcaaattccgaaga
gctagtaagagtaacgccaccaatgcctcgtctggtttttcaggtgtattatccggtatg
aatagctcgaccaacagtacctctagttctgctcaagctccgaaccgatctggaaataat
aatccggcgaatggccaatcaggaatgttgagccgcacgatgcctgctaccaataataca
tccaatgcacacctcacatcggctatgagctcgagtagtggaccttctctacccggtctg
atgtctgcgcaatcattattgggggccccacagactgccatggcggctgctcaacaaaat
tggagaaacggattaaatagtcccaacacgcaatctctgaacagtcccgatccaacaatg
gtcaacaatctggcgatgatgaacacacttgctggcttgaacggtggaatggacatgaat
tccatggcgaacttagccgccatggcgaatatgaccgatccgaatgctcttcagaatatg
gccaatatcctcaacatgcgacaacaaatccaacaagtccaaagtatacaagccctccaa
caacagttacaacagaatgggatgatcgctggtatgatgaacgcagccccacttctctca
ccggccaacaatggcaggtttggaatgaacatgggattcccgatcaacggcggtgcagga
gccggtggcggtgcaggagccggtatggctgggaacaaacgaagccccggtatcggagcc
cgcccggctgcggcggcgaacaaaccgaaccacacacccggctcgggggcgaatccggag
gaagagttagacatgaagctactcggtgatgtatcggcatggttacgaggcttaaggctg
cacaaatatacgcctaactttgaaggctgtacgtggaaggagatggtgatgatgagcgac
tctgacctcgagaatcggggagtggccgcggtgggcgctcgccgaaagatgctcaggacc
ttcgagaccgtccgattgaagaccggaatggccttgcccggtgatggcgatggggcgcga
gacgccaatggcgatcgaatcgaatcggctaccggaaacgttgacaaggtagaggatgaa
gatcgtccgacttctcaacaccaacaacctaccagcaacgtctcagtgactcctgaaagc
gatcaataa
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