Puccinia graminis: PGTG_03411
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Entry
PGTG_03411 CDS
T02226
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pgr
Puccinia graminis
Pathway
pgr03020
RNA polymerase
pgr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PGTG_03411
09124 Replication and repair
03420 Nucleotide excision repair
PGTG_03411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgr03021
]
PGTG_03411
03400 DNA repair and recombination proteins [BR:
pgr03400
]
PGTG_03411
Enzymes [BR:
pgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PGTG_03411
Transcription machinery [BR:
pgr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
PGTG_03411
DNA repair and recombination proteins [BR:
pgr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PGTG_03411
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_5
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
MRNIP
Motif
Other DBs
NCBI-GeneID:
10541041
NCBI-ProteinID:
XP_003321874
UniProt:
E3JZI0
LinkDB
All DBs
AA seq
1131 aa
AA seq
DB search
MTESDGTVSPMFPNEARLRNLTYSSPLYVDMSKSNKLATGEFDEETGEPIYIADDVDNDE
KNSTQIYIGKVPIMLRSEFCILDKLEDPGLYELNECPFDQGGYFVINGSEKVLIAQERMA
ANHVYVFAKAGPLAVEKGSKTVSSMQVKMYGGHKAEKAGGGATIKTTLPYIRNDIPIVVV
FRALGIIPDKDILEHICYDRNDTAMFEMLKPCLEDSFPIQEQEVALDFIGRRGTATGLSR
EKRLKYAEEILQKEMLPHISMSEGQQGKKAYFFGYMIHRLLLAALDRRDLDDRDHFGKKR
LDLAGPLLAGLFRMLFRKLTKDVYRHLQKCVEMQKPFNLNAAVKSNTITNGLKYSLATGN
WGDQKKAMQARAGVSQVLNRYTFASTLSHLRRCNTPIGRDGKIAKPRQLHNSHWGMVCPA
ETPEGQACGLVKNLALMSYISVGSPSAPIVEFLEEWGMESLDEFSSDMSNGTKVFVNGVW
QGVHRAPAELLDTIKRLRRCGDIEPEVSVMRDVRERELRVFTDGGRVCRPLFIVENQQLL
LKKEHIEWLSNGCETAEEDQDAGEEAADDGVPFGWSQLVARGIVEYLDAEEEETVMICMT
PEELEQSREYQETGQVPKENYDPAARLKGNTSMYSHTWTHCEIHPAMILGICASIIPFPD
HNQSPRNTYQSAMGKQAMGVYLTNFRTRMDTMANILYYPQKPLATTRSMEYLRFRELPAG
QNAIVAILCYSGYNQEDSVIMNQSSIDRGLFRSFYYRSYMDQEKRAGALQMEEFEKPTRD
STLRLKHGTYDKLDDDGIITPGTRVSGDDIIIGKTAPIPKDSEELGQRMKTHTKRDVSMP
LKSTENGIIDQVLVTTNQDGLKFVKVRIRSTRIPETGDKFASRHGQKGTVGILYRQEDMP
FTSEGVCPDIIINPHAIPSRMTIGHLVECLLSKVSTITGNEGDATPFSEVTVEAISALLK
DKGYQSRGLEIMFNGHTGKKLRAQCYLGPTYYQRLKHMVNDKIHSRARGPVQILTRQPVE
GRSRDGGLRFGEMERDCMISHGIAGFLKERMFDVSDAYRVHVCDFCGMVAIANLKKQSFE
CRSCRNKTAISQVYIPYAAKLLFQELQSMNIASRFVFESAGEHVSRGDMIM
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatcagatgggacggtatccccgatgtttccgaacgaagcccgccttcgtaac
ttaacttactcttcaccactgtatgtggatatgagcaaatcgaacaaactagccaccggc
gagtttgacgaagagacgggagaaccgatttacatcgccgatgatgtagacaacgatgaa
aaaaattcgactcagatttatattggtaaagtgcctatcatgttgcggtccgagttttgt
atcctcgataaactggaagatcctggtttgtatgagttaaatgaatgtccattcgaccaa
ggtggttatttcgtcattaatggatcggagaaagtgttgattgcccaagaaagaatggca
gccaatcatgtctatgtgttcgccaaagcgggccccctcgccgtggagaaaggtagcaag
acggtgagctcgatgcaagtgaagatgtacggaggtcacaaggccgaaaaagcgggggga
ggtgcaacgatcaaaaccactcttccttatatcagaaacgatatcccgatcgtcgtcgtc
tttagggctctaggaatcatccccgataaggatatcttggaacatatctgttacgatcgt
aatgatacagcgatgtttgagatgctcaaaccgtgtttagaagattcattcccgatccaa
gagcaagaagtggcgctagatttcataggaaggagaggaacagcgaccgggttatcaaga
gaaaagcggctgaaatatgccgaagagatcttacagaaggagatgttaccacatatctcg
atgtcagaaggacaacaaggaaagaaggcatatttctttggatacatgattcatcgactc
ttgttagctgcattagatcgaagagacttggacgatcgagatcatttcggtaaaaagcgt
ctcgatcttgctggcccccttctggctggtctctttcgaatgttgtttcgtaaactgact
aaggatgtctatcgacatctacaaaagtgtgtcgagatgcaaaaaccgttcaatctgaat
gcagctgtcaagtcgaatacgattacgaatggactgaagtattccttggcgacagggaat
tggggggaccagaagaaggcgatgcaagctcgtgcaggggtttcacaagtcttgaatcgc
tatacatttgcatccaccttatcgcatcttagacgatgcaacacgccgatcggccgagac
gggaagatagccaagcctcgacaactgcataactcccattggggcatggtctgtcctgcc
gaaacaccagaaggtcaagcttgtggattggtcaagaatctcgcattgatgtcttacatc
tctgtcggctcaccatccgcgccgattgtcgagttcttggaggaatgggggatggaaagt
ctggacgagttttcatctgacatgtctaatggcaccaaggtcttcgtcaacggggtatgg
cagggagtccatcgtgcaccagccgagcttctcgataccatcaaacgtctacgacggtgt
ggagatatcgagccggaggtatcagtgatgagggacgtacgagaacgagagctgcgggtg
ttcaccgatgggggtcgggtctgtcggccgttatttatcgtggaaaaccaacagttactg
ttgaagaaggagcacatcgaatggctgagtaacggatgtgagacggcggaagaagatcaa
gatgcgggggaggaagcagcggatgatggagttccatttgggtggagccaattagtcgcc
agagggatcgtcgaatatctggatgctgaggaggaggaaacggtgatgatctgtatgacc
cctgaagagttggaacagtcgagagaatatcaagagacgggtcaggtccctaaggaaaat
tacgaccccgccgcgcgtctcaagggtaatactagcatgtattctcatacttggactcac
tgcgaaatccatccggctatgatcttgggcatctgtgcttcgatcattccctttcctgac
cataatcaatctcctcgaaacacataccaatcagccatgggaaaacaagcgatgggcgtc
tatctaacgaactttaggacgaggatggacacgatggcgaacatattgtattatccacaa
aagccactagcgacgacacgttcgatggagtatctcaggttccgagaattgccggcgggc
cagaatgcgattgtggcgatcctgtgttattcgggatacaaccaagaagattcggtgatc
atgaaccaatcgtcgatcgatcgtggcctcttcaggtcgttctactaccgatcatacatg
gatcaggagaagagggcgggtgcacttcagatggaagagtttgagaagccgactcgagac
agtacgctgcgattaaagcatgggacgtatgataagctggatgatgatgggatcattact
ccgggaacacgagtctcaggggacgacatcatcatcgggaagacggcgccgattccgaag
gatagtgaagagctgggacaacggatgaagacgcacacgaagcgagacgtgtcgatgccg
ttgaagtcgacggagaacgggatcatcgaccaagtcctggtgacgacgaaccaggacggc
ctgaagtttgtgaaggtccggatccgctcgacccggatcccggagaccggcgacaagttt
gcatcccgccatggacagaagggcaccgtcgggatcctctatcggcaggaagacatgccc
ttcacctcggaaggcgtgtgtccagatatcatcattaaccctcatgctatcccctctcga
atgacgatcggccatctggtcgaatgtctcttgagcaaagtctccacaatcaccgggaac
gaaggcgatgcgaccccgtttagcgaagtgaccgtcgaggcgatctccgccttgctcaaa
gataagggctaccaatcccgtggattggagatcatgttcaacggccataccggaaagaaa
ctccgggctcaatgctatctcgggcccacttattatcaacggctcaaacacatggtcaat
gataagatccattccagagctagaggacccgtccagatcttgactagacaacctgtcgaa
ggacggtctagagacgggggactccggttcggagagatggaaagagattgtatgatctcc
cacgggatcgcagggtttttgaaagagagaatgttcgatgttagtgatgcatatcgagtg
catgtctgtgacttttgtgggatggtggcgatcgcgaatctgaagaaacagtcgttcgag
tgtcggtcttgtcggaataaaacggccatttcgcaagtctatattccttatgctgccaaa
ctgcttttccaggaacttcagtctatgaatatcgccagtcggtttgtttttgagagtgct
ggggaacatgtttcgagaggtgatatgattatgtaa
DBGET
integrated database retrieval system
