Puccinia graminis: PGTG_03721
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Entry
PGTG_03721 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pgr
Puccinia graminis
Pathway
pgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PGTG_03721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgr03019
]
PGTG_03721
03041 Spliceosome [BR:
pgr03041
]
PGTG_03721
Messenger RNA biogenesis [BR:
pgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
PGTG_03721
Spliceosome [BR:
pgr03041
]
Complex B
Other components
Prp19-related factors
PGTG_03721
Complex C
PGTG_03721
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
NRDE-2
TPR_19
Motif
Other DBs
NCBI-GeneID:
10540587
NCBI-ProteinID:
XP_003322184
UniProt:
E3K0E0
LinkDB
All DBs
AA seq
728 aa
AA seq
DB search
MALGRDAVQVGLEQATEERENGSSQRGPPPIIDTNDVLACRPNMAGIHEGERTGKPEPNN
GQGEPAGTALVEVIKKRSQLLAQAGKRIPNPNLPIQPITSSRLVPRSALATDTDNQSVDG
SQVNLIDFLSQPAANSAALGISASAPAHQPRTLMGEVPSVIKKLTANTQSVPGPPLNAPN
DVHPQINITDENAELGHHPIVGSTSLPRAGLNPMADYRLAHSFFVLVLINQSNRFFSFLV
EIDSPLCTDITFYPTDVEKTIATVYISSVSFEQLNTLGELFKKALAKEAAVIDMDRLKMV
IERAALKTCNVMEVDAADSLSSAIISNFLCGGSSDLISDECGCVYRKYTEALRVIRRATT
VPPNHKKKAISFHDESLAVQVWLFKSLKLWSFCVDLEESIGTVESTQKAYDTIFELKIAN
AQIVVNYGNFLEENEYWEESFKVYKRGIELFTYPIVFEIWNTYLNKFMKHYQGKKIERAR
DLFEQVLEKCPEKFVKPIFLLLAKRAMGVLERATEKVALHDRFEMFAYYIAKATENFGLP
ATRPIYEKAIKSLPNNQTAKMCLRFANLEQKLGKIDQARAIYAHSSQFCDPRTSPKFWET
YHNFEIQHGSEDTFREMLRIKRAVQASFNTETSYLAAKAAAARAAGNRGGGATVSQQQDE
DDETGSGDPMRRLEKDDPASSTTAGNQAFVLLKNRQAQIDRSGPLNPDQQATNNSANVDE
IAINDDDD
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggctctcggccgcgatgctgttcaagttggtctagaacaagcgactgaagaaagggag
aatggctcttcccaacgtgggccacctcccataatcgataccaatgatgtactcgcttgt
cggcccaacatggccggtattcatgaaggcgagcggacaggcaaacctgaacccaacaat
ggacaaggggaacccgcagggacggccttggtagaagtgatcaagaagcgttcccaattg
ctagcccaagccggtaaacgcatcccaaatcccaacttgccgatccaaccgatcacaagc
tctcgccttgtccctcggtctgccttagcaacagatactgacaaccaatctgtggatggc
agtcaagtcaacctgattgatttcttgtctcaacccgccgccaactctgccgctcttggg
atcagcgcttccgcccctgcgcatcaaccgcgcaccttgatgggagaggtcccatctgtt
ataaagaaactcacggccaatacacaatctgtgcccgggcccccattaaatgcacctaat
gatgtgcatccgcagattaacatcactgatgagaatgccgaactgggccatcacccgatt
gttggatcaacttcccttccaagagctgggcttaatccaatggcagactatcggttggca
cactctttctttgttctagtactaataaaccagtctaacagattcttttcctttttggta
gaaattgactccccactatgcacggatatcacgttctacccaaccgatgtggaaaaaacg
attgcgaccgtctacatttcatctgtctcttttgaacaattgaatacgctcggtgaattg
ttcaagaaggccctggccaaagaagccgctgtgatagacatggaccgcctgaaaatggtc
attgagcgagcagccttaaaaacttgcaatgtcatggaagtagatgcagctgacagtcta
tcatcagctatcatatctaacttcctctgcggtggtagctctgatttgatatctgatgag
tgtggatgtgtctataggaagtatacagaagcactgagggtgatcagaagggcaacgacg
gtgcctccaaatcataagaagaaggcgatcagcttccacgatgagtctttggccgtccaa
gtttggttgttcaagtctctcaagctttggtctttttgtgtcgatctggaagagtctatc
gggacggtcgagtcgactcagaaagcttatgatactatctttgagctgaagattgccaat
gcgcagattgtagtgaattatggaaatttcttggaagagaatgagtattgggaagagtca
ttcaaagtatacaaacgcgggatcgagttatttacgtatccaatcgtgtttgagatctgg
aacacgtatctgaacaagttcatgaagcactaccaggggaagaagattgagcgggcacgg
gatctgttcgaacaagtgttggaaaaatgtccggagaagttcgtcaagccaatcttcctc
ttgctcgccaaacgggccatgggcgtgcttgaacgagctactgagaaagtggcgctacat
gaccgctttgaaatgttcgcttattatatcgctaaagctaccgaaaactttggactacct
gcgactcgtccgatctatgaaaaagcgatcaagtcgttgcccaataatcagaccgccaaa
atgtgtctaaggttcgctaatcttgagcaaaagttgggcaagattgatcaggctagagct
atttatgcccattcttcccagttttgcgatcccagaacttcgcctaagttttgggaaact
taccataattttgagattcaacatggaagtgaagatacatttagagagatgttaaggatt
aaacgagccgttcaagcttcattcaacacggagacatcctatctggcagccaaagcagca
gccgcaagagccgctggtaatcggggtggtggggccactgtctctcaacaacaagatgaa
gatgatgaaacaggatcaggagacccgatgcgtagactcgaaaaagatgaccctgcttct
tctactactgcgggcaatcaagctttcgtcttgttgaaaaataggcaggctcaaatcgac
cgttctgggccccttaaccccgatcaacaagctaccaataattccgctaatgttgatgag
attgcaatcaatgatgatgatgattaa
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integrated database retrieval system
