Puccinia graminis: PGTG_04057
Help
Entry
PGTG_04057 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
pgr
Puccinia graminis
Pathway
pgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PGTG_04057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgr03019
]
PGTG_04057
Messenger RNA biogenesis [BR:
pgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PGTG_04057
mRNA degradation factors
5'-3' decay
Decapping complex
PGTG_04057
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
10541571
NCBI-ProteinID:
XP_003322520
UniProt:
E3K1C6
LinkDB
All DBs
AA seq
949 aa
AA seq
DB search
MSFMDDPGGHYPLDRKLAQLRADFGEDIAVYDYADDGLIESTAGLEEDMNDFNDETFGMD
TVDKDFDFSGSTAQYLGVSEPPKQKPQGGASWTTMSSLLADREPGGSSTPRPSSPPRRKA
GPVSLLDDPLLAPKSTISHRHSSGPFTPPKPPGSAPATTISKPHKIRTLEEIEAELRANS
AAKNSIPSSSLPPQALTLEQVEAALLANHERKLATTTASRSSTPHALPFSQPSLQGRTPS
VQHIQRNINLQPVMSSPVMAPMTRPSHTPSSLPPHNHPAHPAHPQHSEWLRLQQQQHQMY
TNIPTQQHMPIQPLMSRLPAMPSPPQVLPGRHLSNPPGVGFGPNMRAGSVPPRSATQTPF
VQASNVTIPVEELRSAAEARIQEQERREALRRRKAAKIAEMSKYNNLMSQGDKDFITRIQ
VSQLVNPSHGQVGFDPYADDFYFHVYSAIRASRMAAQHQFHTANAGRRTHTASSDERISQ
DYDGVGGFEPVRNSRTVERRLTRRDHAMIRMAQNVQRIIDHAKERPKMSQVSLEGALGKI
SLRTRSAPRQMLQVQPTSSDDLTTAAGGENHPGALAGSLPNTTPIGAGQPAMRHRQILMS
LERLYSTVLEVEQLRRTQPNVQLSGFDMEEANSQLEEWEAQYESQKEKIWKQLRVLDPLG
ISHPHPFVSLISVPKGKRVLPRVIRLLNREQSLQVLTLLVATFESLDVVSDARLLDLPSE
SPFPLGKRSRPEFELETELFMNCVVAPMMTVINEISLDLVTGLVSLLMARNDLMLIARSK
AGIAFLTLFLSRAELLRSAPPLESQEQNDSTLPSHESILRWQGVFNQLFHYLSSDFPSLF
PSTRLAGALSLGAGLPPQAMTDSLEMNQKYMRPGIDLEDEPVWQLMAALAVSTDSDGQQT
LVGGLRGKVLENVIAVSKKSVSDEIGAFKIRNVNLMLHALGLDASMIKL
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcatggacgatcccggtggtcactaccccctcgatcgaaagctggctcaatta
cgggctgacttcggagaggacatcgcggtctatgactacgcagatgacggcttgatcgag
tctacggctggactggaggaagacatgaacgattttaatgacgagactttcggaatggat
actgtcgataaagatttcgatttctcgggttccacggctcaataccttggtgtctctgaa
ccccccaagcaaaaacctcaaggtggtgcgagttggactaccatgtcaagtctcttggcg
gaccgtgagcccggcggatcttcaactcctcgtccttcttcaccgccccgtcggaaggcc
ggacccgtcagcctactcgatgatccattgctcgcgcccaaatcgaccattagccaccgc
cactcaagcggcccattcactcctccaaagccacccggaagtgcgccggctaccaccatc
tccaaacctcacaagatccgtaccttggaggagatcgaagcagaactccgagccaactcc
gctgcaaagaactcgatcccctcatccagtctccctcctcaggcattgactctcgaacaa
gttgaagctgcgctgttggcgaaccatgaaagaaagctcgcgacaactaccgccagcaga
tcatccacccctcatgcactccccttctctcagccttctttacagggtcggactccgtca
gtacagcacatccaacgcaatatcaacctacaaccagtcatgtcatctcccgtcatggcg
ccaatgacccggccaagccacactccatctagtttgcctccgcacaatcatccagctcac
ccagctcatccgcaacattcggaatggttacgtctgcagcagcaacagcatcaaatgtac
accaacattccaacgcaacaacatatgcctatccagcccttaatgtcacgccttccagcc
atgccttctcccccccaagtcttacctggtcgacatttatccaatcccccgggtgtcggc
tttggccctaacatgagagctggatctgtcccgcctcggagtgcgactcaaaccccattt
gttcaggcctctaatgttacaattccggttgaagaacttcgatctgcggctgaagctcgt
atacaagaacaagagcgacgagaagctcttcgtcgccgaaaggctgccaagattgctgag
atgtcaaagtacaacaatcttatgagtcaaggtgacaaagatttcatcacgcggatccaa
gtctctcaacttgtcaaccccagccacggccaggttggctttgacccgtatgccgatgac
ttctacttccacgtatactctgccatccgtgctagtcgaatggctgctcagcaccagttt
cacacagcaaatgctggtagacgaacccataccgcttcttccgacgagaggatcagccaa
gactatgatggagtcggtggattcgagccagtccggaactcccgaacggtcgaaaggcgt
ttgactcggcgggaccatgcgatgattcgaatggcgcaaaatgttcagcggatcatcgat
cacgcgaaggagcgcccgaagatgtcacaagtttcgttggagggagcgttgggtaaaatt
tctctgcgaactcgttctgcgcctagacagatgcttcaagtccaaccgacgtcttcagac
gatttgactacagctgcaggaggtgaaaatcatcctggggcgctagcgggttcattgcca
aacactactccgataggtgctggtcaacccgccatgcgtcaccgacaaattttgatgtca
ttagaaagattatattctacagtacttgaagtcgaacagttacgccgaacccagcccaac
gtccaattgagtggattcgatatggaagaggcgaatagtcaactggaagaatgggaggct
cagtacgaaagtcaaaaggagaagatttggaagcagcttagagtcttggatccccttggt
ataagccacccccaccccttcgtctcgttaatttccgttccaaagggcaaacgtgtcctt
cctcgagtgatccgactcttgaatcgggagcaatcccttcaagttctcaccctactcgtc
gccactttcgaaagcctcgatgtcgtgtccgatgcgcgtttactcgatctcccctcggag
tcgcccttcccactggggaaacgaagtcgaccggagtttgaattggagaccgagctgttc
atgaactgtgtggtggcaccgatgatgactgtcattaatgagatctcgttagatcttgtc
actgggcttgtctcacttttgatggcgcgcaacgacctcatgctgattgcacgctcgaaa
gcggggatcgcattcttgaccttgtttttaagtcgtgcggagctgctaaggagtgcacca
cctctcgagagtcaagaacagaacgactcaactcttccgagccacgaatcgatcttaaga
tggcaaggggtgttcaaccaattgttccactatctcagttccgactttccgtctctattc
ccatcgacccgtttagctggagcattgtccttaggagctggcttaccaccacaagcgatg
actgattcgcttgagatgaaccagaagtacatgaggcctgggatcgatctcgaggatgaa
ccggtctggcagttgatggccgccctggccgtttcgaccgactccgatggacaacaaact
ttggtgggcggattgagaggtaaagtcttggagaacgtcatcgccgtcagcaagaaatcg
gtctcggatgaaatcggagctttcaaaattagaaatgtcaatttgatgctacatgctttg
ggactagacgcaagtatgataaagctttag
DBGET
integrated database retrieval system