KEGG   Puccinia graminis: PGTG_04057
Entry
PGTG_04057        CDS       T02226                                 
Name
(RefSeq) hypothetical protein
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
pgr  Puccinia graminis
Pathway
pgr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pgr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PGTG_04057
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgr03019]
    PGTG_04057
Messenger RNA biogenesis [BR:pgr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PGTG_04057
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     PGTG_04057
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 10541571
NCBI-ProteinID: XP_003322520
UniProt: E3K1C6
LinkDB
AA seq 949 aa
MSFMDDPGGHYPLDRKLAQLRADFGEDIAVYDYADDGLIESTAGLEEDMNDFNDETFGMD
TVDKDFDFSGSTAQYLGVSEPPKQKPQGGASWTTMSSLLADREPGGSSTPRPSSPPRRKA
GPVSLLDDPLLAPKSTISHRHSSGPFTPPKPPGSAPATTISKPHKIRTLEEIEAELRANS
AAKNSIPSSSLPPQALTLEQVEAALLANHERKLATTTASRSSTPHALPFSQPSLQGRTPS
VQHIQRNINLQPVMSSPVMAPMTRPSHTPSSLPPHNHPAHPAHPQHSEWLRLQQQQHQMY
TNIPTQQHMPIQPLMSRLPAMPSPPQVLPGRHLSNPPGVGFGPNMRAGSVPPRSATQTPF
VQASNVTIPVEELRSAAEARIQEQERREALRRRKAAKIAEMSKYNNLMSQGDKDFITRIQ
VSQLVNPSHGQVGFDPYADDFYFHVYSAIRASRMAAQHQFHTANAGRRTHTASSDERISQ
DYDGVGGFEPVRNSRTVERRLTRRDHAMIRMAQNVQRIIDHAKERPKMSQVSLEGALGKI
SLRTRSAPRQMLQVQPTSSDDLTTAAGGENHPGALAGSLPNTTPIGAGQPAMRHRQILMS
LERLYSTVLEVEQLRRTQPNVQLSGFDMEEANSQLEEWEAQYESQKEKIWKQLRVLDPLG
ISHPHPFVSLISVPKGKRVLPRVIRLLNREQSLQVLTLLVATFESLDVVSDARLLDLPSE
SPFPLGKRSRPEFELETELFMNCVVAPMMTVINEISLDLVTGLVSLLMARNDLMLIARSK
AGIAFLTLFLSRAELLRSAPPLESQEQNDSTLPSHESILRWQGVFNQLFHYLSSDFPSLF
PSTRLAGALSLGAGLPPQAMTDSLEMNQKYMRPGIDLEDEPVWQLMAALAVSTDSDGQQT
LVGGLRGKVLENVIAVSKKSVSDEIGAFKIRNVNLMLHALGLDASMIKL
NT seq 2850 nt   +upstreamnt  +downstreamnt
atgtctttcatggacgatcccggtggtcactaccccctcgatcgaaagctggctcaatta
cgggctgacttcggagaggacatcgcggtctatgactacgcagatgacggcttgatcgag
tctacggctggactggaggaagacatgaacgattttaatgacgagactttcggaatggat
actgtcgataaagatttcgatttctcgggttccacggctcaataccttggtgtctctgaa
ccccccaagcaaaaacctcaaggtggtgcgagttggactaccatgtcaagtctcttggcg
gaccgtgagcccggcggatcttcaactcctcgtccttcttcaccgccccgtcggaaggcc
ggacccgtcagcctactcgatgatccattgctcgcgcccaaatcgaccattagccaccgc
cactcaagcggcccattcactcctccaaagccacccggaagtgcgccggctaccaccatc
tccaaacctcacaagatccgtaccttggaggagatcgaagcagaactccgagccaactcc
gctgcaaagaactcgatcccctcatccagtctccctcctcaggcattgactctcgaacaa
gttgaagctgcgctgttggcgaaccatgaaagaaagctcgcgacaactaccgccagcaga
tcatccacccctcatgcactccccttctctcagccttctttacagggtcggactccgtca
gtacagcacatccaacgcaatatcaacctacaaccagtcatgtcatctcccgtcatggcg
ccaatgacccggccaagccacactccatctagtttgcctccgcacaatcatccagctcac
ccagctcatccgcaacattcggaatggttacgtctgcagcagcaacagcatcaaatgtac
accaacattccaacgcaacaacatatgcctatccagcccttaatgtcacgccttccagcc
atgccttctcccccccaagtcttacctggtcgacatttatccaatcccccgggtgtcggc
tttggccctaacatgagagctggatctgtcccgcctcggagtgcgactcaaaccccattt
gttcaggcctctaatgttacaattccggttgaagaacttcgatctgcggctgaagctcgt
atacaagaacaagagcgacgagaagctcttcgtcgccgaaaggctgccaagattgctgag
atgtcaaagtacaacaatcttatgagtcaaggtgacaaagatttcatcacgcggatccaa
gtctctcaacttgtcaaccccagccacggccaggttggctttgacccgtatgccgatgac
ttctacttccacgtatactctgccatccgtgctagtcgaatggctgctcagcaccagttt
cacacagcaaatgctggtagacgaacccataccgcttcttccgacgagaggatcagccaa
gactatgatggagtcggtggattcgagccagtccggaactcccgaacggtcgaaaggcgt
ttgactcggcgggaccatgcgatgattcgaatggcgcaaaatgttcagcggatcatcgat
cacgcgaaggagcgcccgaagatgtcacaagtttcgttggagggagcgttgggtaaaatt
tctctgcgaactcgttctgcgcctagacagatgcttcaagtccaaccgacgtcttcagac
gatttgactacagctgcaggaggtgaaaatcatcctggggcgctagcgggttcattgcca
aacactactccgataggtgctggtcaacccgccatgcgtcaccgacaaattttgatgtca
ttagaaagattatattctacagtacttgaagtcgaacagttacgccgaacccagcccaac
gtccaattgagtggattcgatatggaagaggcgaatagtcaactggaagaatgggaggct
cagtacgaaagtcaaaaggagaagatttggaagcagcttagagtcttggatccccttggt
ataagccacccccaccccttcgtctcgttaatttccgttccaaagggcaaacgtgtcctt
cctcgagtgatccgactcttgaatcgggagcaatcccttcaagttctcaccctactcgtc
gccactttcgaaagcctcgatgtcgtgtccgatgcgcgtttactcgatctcccctcggag
tcgcccttcccactggggaaacgaagtcgaccggagtttgaattggagaccgagctgttc
atgaactgtgtggtggcaccgatgatgactgtcattaatgagatctcgttagatcttgtc
actgggcttgtctcacttttgatggcgcgcaacgacctcatgctgattgcacgctcgaaa
gcggggatcgcattcttgaccttgtttttaagtcgtgcggagctgctaaggagtgcacca
cctctcgagagtcaagaacagaacgactcaactcttccgagccacgaatcgatcttaaga
tggcaaggggtgttcaaccaattgttccactatctcagttccgactttccgtctctattc
ccatcgacccgtttagctggagcattgtccttaggagctggcttaccaccacaagcgatg
actgattcgcttgagatgaaccagaagtacatgaggcctgggatcgatctcgaggatgaa
ccggtctggcagttgatggccgccctggccgtttcgaccgactccgatggacaacaaact
ttggtgggcggattgagaggtaaagtcttggagaacgtcatcgccgtcagcaagaaatcg
gtctcggatgaaatcggagctttcaaaattagaaatgtcaatttgatgctacatgctttg
ggactagacgcaagtatgataaagctttag

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