Puccinia graminis: PGTG_04094
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Entry
PGTG_04094 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
pgr
Puccinia graminis
Pathway
pgr03440
Homologous recombination
pgr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PGTG_04094
03450 Non-homologous end-joining
PGTG_04094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgr03032
]
PGTG_04094
03400 DNA repair and recombination proteins [BR:
pgr03400
]
PGTG_04094
DNA replication proteins [BR:
pgr03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
PGTG_04094
DNA repair and recombination proteins [BR:
pgr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
PGTG_04094
BRCA1-C complex
PGTG_04094
NHEJ (non-homologous end-joining)
MRX complex
PGTG_04094
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_21
AAA_15
SMC_N
SbcC_Walker_B
AAA_29
NET2A
ABC_tran
AAA_13
AAA_16
Maelstrom
Motif
Other DBs
NCBI-GeneID:
10541768
NCBI-ProteinID:
XP_003322557
UniProt:
E3K1G3
LinkDB
All DBs
AA seq
1359 aa
AA seq
DB search
MKEPVDFEHPRRRTTTIHPVSRNEKITKRRSRDWPRRRSTSQNVLDPSNQTSSLSQIDKL
AIRGIRSFDNQSIAVIQFYSPLTVIVGHNGSGKTTIIESLKYITTGDLPPNTKGGAFVHD
PSIAGESVVMAEVLLRFKNLAGAKLIASRRLQVSKKKNTALTMKTLEGTLSYNDDSSAPN
SKRRTISTKCAEMDSEVPRHLGISKAILENVIFCHQEESNWPLSEPASLKKKFDEIFEAT
KYTKALDNIKSIKKEAAVELKVDKEKYAALVVDKNRAEKLQNTIDKLTAGISAKKEQYKE
LEIKVKDLGESNKSFYEQAARFHQVVNEHSTLSDKKANKAKIAEDLKEDMVEMADSTMSQ
LHEQREQSKSSLSSHTQRLASAKSELATVEGELTKSRHKHQAKLTEFGQLKAQAQRKLAA
LGERQKIIVDVSSTHNIPEFQLEITNEYQVTEFFNLLRDRQKLVVTKLQSTKTAGKKAEE
ERQTEIYELKNQRGATQQQKQACSDRMSVIRVKIQNLMDQIGGIKVTKGDIKYLSENLEA
KLESSKNLKEENENAGHDQRIKAKQEGIRQLEDARENLHAELVGLNRESDTRAKLSLKRS
DVMRKQQGIEALIEEHGAKFRELVKMEFAPKTAEKEIISVLRMTERTLSEATQHYTKVTK
DMQTNETKLQMNKSNLASTEAELETLEKKINRVTKGTSLTSGIRDTELEIQDLQRDLNAV
GFLVAFHEKLLRDSKEPNKCGICHRMFKNEEEMAVFERHCQNTIDRQPAEKVQNETKLQG
WKAQLERFKKILPLDISATKLRDTDITNLKKEISTLESQFDSASRKVEEAKIKVDKLKDL
IGELEICKRSAADASRMSEEIDELQNEIKNLERDLESSGTKRTADQVQEELDDLQLQIGE
SKRELESHIADRDRKRMAIHNLESEIHQLELNLNSKRQQKKERDNFEAQREDFKKEIADL
EQKTKEIEETLKKFAEPLRAKEIELEEIRAENVAAEAEQTNELQSYNKSLSRLETINSEI
QRFNEMDIGANSERCQREIQALVEKIKAITQQISKLQDDLQALDKEQDRAKALERNITDN
IRYRNYKLEIQELEDKISRIDVGKAREACQKYDAEYHKAEKWLADLKAEQAKLGGEIGMD
KNNLKEKMEERESDFKDIIKRHRAQLVKVKTVEIANQDLDKYAKALDQAIMKYHSHKMAE
INDTIQTLWNKTYQGTDIDNISIKSENENAKSNRSYNYRVVMMKDQVEMDMRGRCSAGQK
VLASIIIRLALAESFGTNCGILALDEPTTNLDKENIDALANSLAEIIKERRDQANFQLVV
ITHDEDFLNRLGQADVLDKYWRVSRNQQQKSIIERQRMI
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaccagttgactttgaacatccaagaagacgtactacaactatccatccagta
tcgagaaacgaaaaaataacgaaacggaggagtagagactggcccagaaggcggtcaact
agccaaaatgtactcgacccctccaatcaaaccagttctttgtcccaaatcgacaaacta
gcaatacgcgggattagaagcttcgataatcagtcaatagccgtcattcaattttattct
ccactaactgtcatcgttggtcacaatgggagtggaaaaaccacaataatcgagagttta
aaatacatcacaaccggtgatttgccgcccaacactaaaggtggtgcattcgtacacgat
ccttcaattgctggtgaatccgtggtgatggccgaagtcttactaaggttcaagaacctg
gcgggggccaagttaatcgcaagtagaagactacaggtgtccaagaagaaaaataccgcg
cttacaatgaaaacactcgagggcactctatcctacaatgatgatagctctgctcccaac
tcgaagagaaggaccatttctaccaaatgcgccgagatggattccgaagtaccgcgacat
ctaggtatctcgaaggctatcctggaaaatgtcatattttgtcatcaagaggagagtaac
tggccgctatctgaacctgcaagtttgaagaaaaaatttgacgagattttcgaagctacc
aagtacaccaaagctttagataatatcaagtcaatcaagaaagaagcggccgtcgagttg
aaagttgacaaagaaaaatacgctgctctggtagttgacaagaatcgggccgaaaaactt
caaaataccatcgacaaacttacggccggcatttcagccaaaaaagaacaatacaaagag
ttggaaatcaaggtcaaagacctgggtgaatcgaacaaatcgttctatgagcaagctgct
cggtttcaccaggttgtcaacgagcattctacactctccgacaaaaaagcaaataaagcc
aaaattgccgaagatctcaaggaagatatggtggaaatggctgactcaactatgtcgcaa
ttacatgaacagcgagagcaatccaagagtagtttatccagtcatactcaacgtctagcg
agtgccaagtcagaattagcgacagtcgaaggagaacttacgaaatctcgccataagcac
caagccaagctcaccgaattcggtcaactcaaagctcaagcccaaagaaaactggctgcg
ctgggagagcgacagaaaattatagtcgacgtcagttcaacgcataatatacccgaattc
cagctggaaataacgaacgaatatcaagttaccgagttttttaacttactgagagatcgc
caaaagcttgtcgtcactaagcttcagagcaccaagaccgcaggtaaaaaagctgaggaa
gaaagacaaacggaaatatatgagctgaagaatcaaagaggagctactcaacagcaaaaa
caagcttgttcggatcgcatgagcgtgattagagtaaaaattcaaaacttgatggatcag
attggagggatcaaagtgactaaaggtgatatcaaatacttatcagagaatctcgaagct
aaactggagagttcgaagaatctcaaggaagaaaatgaaaacgccggtcatgatcaaagg
atcaaagcaaagcaggaaggcattagacagttggaagatgcacgggagaaccttcacgct
gaactagttggactaaatcgtgaatccgatactcgagccaagctttcgttgaaacgttcc
gatgttatgaggaagcagcagggaatcgaggctttgattgaggaacacggggcgaaattt
cgagagttggtgaagatggagttcgcgcccaagactgctgaaaaagagattatcagcgtt
ctccgtatgacggagcgtactctatcagaggccacccaacattacactaaggtgacgaaa
gacatgcaaacaaacgagactaaattacaaatgaacaagtcgaacctagcgtcaactgag
gcagagcttgagactcttgaaaaaaagattaaccgcgtgacgaaaggtacatcgctcacc
tcagggattagagatacagaattggaaattcaagatctgcagagggatctgaatgccgtt
gggtttcttgtcgcatttcatgagaaactactcagagattccaaagagcccaataaatgt
ggaatttgccaccgtatgttcaagaatgaagaggaaatggccgttttcgagcgccactgc
caaaatacgatcgacagacaacctgctgaaaaagtccaaaacgagacaaagctacaaggt
tggaaagctcaattggaacgcttcaagaagattttgcctttggacatatcggcaactaag
cttcgagatacagatataacaaacttgaaaaaggaaataagcacccttgaatcacaattt
gacagcgctagccgaaaggtggaagaagcaaagatcaaggtagataaactgaaagatctg
atcggtgaactcgaaatctgcaagcgctctgccgcagatgcgagtagaatgtctgaagaa
attgatgaactccaaaatgaaatcaagaaccttgagagagatttagaaagctcgggcacc
aaaaggacagcagaccaggttcaagaagagctggatgatctgcaattacaaattggggaa
tcgaagagagagcttgagtcccatattgccgaccgggacaggaaacggatggcgatacac
aacctggaaagcgaaattcaccagttggaattgaacttgaattcgaagcggcagcaaaag
aaagaaagagacaatttcgaagctcagagggaggatttcaaaaaagaaattgctgacctc
gaacagaagacaaaagaaattgaagaaacattgaagaaatttgctgaacctttacgggcc
aaggagattgagttagaagagatacgtgcggaaaatgtggctgcagaagctgaacagaca
aatgaactccaaagttacaataaaagtctgagtcgattggagactatcaatagtgaaatc
caaagatttaacgaaatggatattggtgcaaattctgaacgctgtcaacgagaaattcaa
gcacttgtcgaaaaaatcaaagcgatcacccaacagatatcgaaactgcaagacgattta
caggcgttggataaagagcaagaccgggcaaaagcgctcgaaaggaatattactgataat
attcgttaccgaaactataaactcgagattcaagagttggaagacaaaataagtagaata
gacgttggaaaggcgagagaagcttgccaaaaatatgatgccgagtatcacaaagcagaa
aagtggttggccgacctcaaagctgaacaagctaaactcggtggagagatcgggatggat
aaaaacaatttgaaagaaaaaatggaagaaagggaatctgattttaaggatatcatcaaa
cgacatcgggcccagctagtcaaagttaagactgtcgaaatcgcaaatcaggatttagat
aaatacgctaaagctctcgaccaagcaattatgaaatatcattctcataagatggctgag
ataaacgatacaattcagaccttgtggaacaaaacttatcagggaacagacattgataac
atttcaatcaagtccgaaaacgaaaacgccaagagcaatcgatcttacaactaccgagta
gtaatgatgaaagatcaagtcgaaatggacatgaggggtcgttgctctgctggccaaaag
gttttagcgtcgatcatcatcagattagcattggctgagtcatttgggaccaattgtggc
attcttgccctcgatgaacctaccactaatttggataaggagaacattgatgcattggcc
aattccttagctgaaatcatcaaagagagaagggatcaggcaaatttccaattggtagtt
attacccacgacgaagattttctgaatagattaggtcaggctgatgttttggacaagtac
tggcgtgtcagtcgaaaccagcagcaaaaatcgatcattgaacgacagcggatgatctaa
DBGET
integrated database retrieval system