Puccinia graminis: PGTG_05247
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Entry
PGTG_05247 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K14848
ribosome assembly protein RRB1
Organism
pgr
Puccinia graminis
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgr03009
]
PGTG_05247
Ribosome biogenesis [BR:
pgr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
PGTG_05247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
CAF1C_H4-bd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
WD40_RFWD3
ANAPC4_WD40
eIF2A
WD_LRWD1
PEP5_VPS11_N
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
10534039
NCBI-ProteinID:
XP_003324441
UniProt:
E3K6L6
LinkDB
All DBs
AA seq
616 aa
AA seq
DB search
MHTTANQNFEKPMRQLDRQDQNTGKGNEGRLNNEGSGKIERSKKNKTAMTKPSGTQGNRK
RSLSKSTKRTAAETDGQSPNKSTAVVDKDDLPARLNAVVSLDQAEEGIGEFEDAWEDEFE
DEIGSEGHSVHFNPDDEEDENEDEDIIPGDGKELGQDEDDEQDGMAKDRSRSASPQAYLP
HLHGNKLAEDEELVADPTAYKMLHSLSLTWPALSFDVLRDDLGEQRSRMPHSACIVAGTQ
AEMSGDVDQDEIMIMKWEGLSRMRKDPTLEDEDEEEDEEEDEDEVEEEPTLSFRTIPHKG
SVNRVKAQSLPTPLSLRPPRPPDNYFAATFSGTGKVHIFDIAPQLYALQCPADAADQPMS
KKPFHTINSHGRAEGFALSWGPANTNQTGGASLRLLTGDVHSKIFLTTSTKAGFTTNATP
YTSHTSSVEDLQWSPSEPTVFASCSADQSLRIWDIRVKERKNVLGVSKAHPADVNVLSWN
QSTSYLIVSGGDEGGLKVWDLRNLQSKNKQENRPVADFQYHKSAITSVEWNALEDSCFAA
SSADDQVTLWDLSVEVDAEEKKTMAKDNAQQPFPDQLLFSHQGQKEIKEVHWHPQIPGCV
ISTALDGLNVFKTISI
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcataccaccgccaatcaaaatttcgaaaaacccatgagacaactggacaggcaagac
caaaataccggcaaaggaaacgaaggaagacttaacaacgaagggagtggaaagattgaa
cgaagcaagaaaaacaaaactgcgatgaccaagccgagcgggacgcaaggcaatcggaaa
cgctcgctgagcaagtcgaccaagagaacggccgcggagacggatggacagagtcccaac
aagtcgacggcggtggtcgataaggatgaccttccggcacgcctgaatgcggttgtcagt
ctcgaccaagccgaggaggggatcggggagttcgaggacgcctgggaggacgagttcgag
gatgagatcggctccgagggtcatagcgttcacttcaatcctgacgacgaggaggacgag
aacgaggacgaggatatcatccctggggatggaaaagaacttggacaggacgaggatgac
gaacaggatggaatggccaaagaccgctctcgatctgcctctccacaggcatacctaccc
cacctccacggaaacaaactcgcggaagatgaggaacttgttgcggatccgacggcgtac
aagatgttacatagcttatcattgacatggccggcgctttcttttgatgtgcttcgggat
gaccttggcgagcaacggagtcgtatgccccattcggcgtgtatcgtggcgggaacccaa
gcggagatgagtggggacgtggaccaggatgagatcatgattatgaagtgggaagggctg
agccggatgcgcaaggacccgactctggaagacgaggacgaggaagaagatgaagaggaa
gacgaggacgaagtcgaggaagagccgaccctttccttcaggacaattccccacaaaggc
tctgtcaaccgggtcaaggcccaatctttgcccaccccgctctccctccgaccgcctcga
cctccggacaactactttgccgctaccttttccggcactggaaaggtgcacatctttgac
attgcacctcagctatatgcgctccaatgtccggccgatgcggccgatcagccgatgtcg
aagaagccgtttcacaccatcaacagccacggccgggccgaaggcttcgcgctctcatgg
ggtccagccaacactaatcaaaccggtggagcctcgttacgactcttgaccggtgacgtt
cactccaagatcttcctgaccacctccaccaaggccggcttcaccaccaatgccacccct
tacacctcccacacatcctcagtcgaggatctccaatggtctccctcggagcccaccgtc
tttgctagctgctccgccgatcagagtctcaggatctgggacatccgcgtcaaggaacgt
aagaacgtcctcggcgtcagcaaggcccatcccgctgacgtcaatgtactcagttggaat
cagtccacctcttacttgattgtctccggtggagacgaaggagggcttaaagtctgggat
ctcaggaacctccaatcgaaaaacaaacaagagaacagaccggtagccgatttccaatac
cacaagtcagcaatcacctcagtcgaatggaacgcactagaggattcatgttttgcggca
tcgagtgcggacgaccaggtgacgttgtgggacctgtcggtggaggtggatgcggaggag
aaaaagacgatggctaaggacaatgctcagcaaccgtttccagaccaactcctcttctcg
catcagggccagaaagaaattaaggaggttcattggcatcctcagatccctggctgcgtc
attagtaccgccctggacggcttgaacgtgttcaagacgatttcgatttga
DBGET
integrated database retrieval system