KEGG   Puccinia graminis: PGTG_05665
Entry
PGTG_05665        CDS       T02226                                 
Name
(RefSeq) hypothetical protein
  KO
K12619  5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
pgr  Puccinia graminis
Pathway
pgr03008  Ribosome biogenesis in eukaryotes
pgr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pgr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PGTG_05665
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PGTG_05665
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pgr03021]
    PGTG_05665
   03019 Messenger RNA biogenesis [BR:pgr03019]
    PGTG_05665
   03009 Ribosome biogenesis [BR:pgr03009]
    PGTG_05665
   03016 Transfer RNA biogenesis [BR:pgr03016]
    PGTG_05665
Transcription machinery [BR:pgr03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     PGTG_05665
Messenger RNA biogenesis [BR:pgr03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     PGTG_05665
Ribosome biogenesis [BR:pgr03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    PGTG_05665
Transfer RNA biogenesis [BR:pgr03016]
 Eukaryotic type
  tRNA degradation factors
   Rapid tRNA decay (RTD) pathway factors
    PGTG_05665
SSDB
Motif
Pfam: XRN_M XRN_N zf-CCHC DUF5677
Other DBs
NCBI-GeneID: 10531168
NCBI-ProteinID: XP_003323763
UniProt: E3K529
LinkDB
AA seq 1203 aa
MGVPALFRWLSKKYPKVVEQVIEDVPAQNAVDGGTEEVPIDMSQRNPNGMEFDNLYLDMN
GIVHPCTHPEGKKPPETEAEMMIEVFKYTERVVNMVRPRKLLMIAIDGVAPRAKMNQQRS
RRFRAAQEAKVKEEEKQALIEEYKQQGKELPEDYKTDKKAWDSNAITPGTPFMTLLTESL
RYWIVYKMNTDKGWSQIQVILSDASVPGEGEHKIMDFVRRQRTQPSYDPNTKHVIYGLDA
DLIMLSLATHEPHFKVLREDVFADQKKGKGCYTCGQLGHHSSQCQGKPKEKVDEHDTKQK
PVERKPFIFLDVGILREYLAIELNIGGLPFPFDIERAIDDWVLLIFFVGNDFLPHLPSLE
IREGAIDTLLKIWKTNLGRMGGFLTDCGALNLKRTEIILEGLASREDEIFRRRREAEERQ
DQSAKRRKIDDDNKQVHIKSSTTNQPLPTSNLGNLSTTLNVPLKPTFLPEDVRQTTQSAI
PGLGNASLSMMSNADVVKNRFAIRTANMDAAAMLKAELSGTLELPTSAPAGDDATKMTME
STDVALAESQVPLEANTETPGVTQAESDAPTGTQNPSNESHSAIDTSQGKPSNAENDESA
ATTNGKDSCQDSAAGPPDGETESTVKPPTPVQKRKADELESADPAIGPIDDSVVLSEDED
EDEAPGDVSVFVPGEPSRPAPLKMLGNNMVEQDDTVKLWEPGYRERYFRQKFGIELNDEV
EKRKIVKHYVEGLAWVLAYYYQGCQSWQWFYPYHYSPFASDFTNLEEFEIKFNLGQPFKP
YEQLMGVFPAASRCHIPDVYHDLMMNDDSPIKDFYPEEFEIDMNGKKMLWQGVALLPFIE
QDRLLNSMKDCEDRLAPEDKIRNEPGHVVMFCGEAHPQYENFCKIYQKRDNKEAVTLDPA
HANGVFGSALPDPDCIPGSTFYSPLPTVGLPDISNDKSIFARFFVPSQLVPHRSLLLSGV
ALERPILNNHDRDLTRRGGNQAHGGNQHYGSDGFHQQRRDFGDGPGIMTHYHTNNSNFNG
GGGGYWNSNRGSGNHSQYQQPHHSTHAHDYRNSGPPAGNHRGYSNGPAHHHHNGYPQGGH
HSQRAPYGLPTSFGSTNARGGGGYRPPHSAPQSSYYNAPMNHNNGGYVPPVRYGGTGVGL
PQRAPPAPFADPYPPPTQSSTHYSRAGYRPPGITPAFTRTVPNYPPRAAQQPSRPPYDHS
SGR
NT seq 3612 nt   +upstreamnt  +downstreamnt
atgggcgtacccgccttgttcagatggttgtcgaaaaaataccccaaagtcgtggaacaa
gttatcgaagacgtgccggcgcaaaatgcagtcgatggaggcaccgaggaagtgccaatc
gacatgagtcaaagaaaccccaacggaatggaatttgacaatctatatctcgatatgaat
ggtatcgtccatccttgtactcaccctgagggtaaaaaaccgccagaaaccgaggcagaa
atgatgatcgaagttttcaaatatactgaaagagtcgtcaacatggtccgacccaggaaa
ctattgatgattgcaatcgacggggttgcgccacgagcaaagatgaaccaacaacgttcc
cgtcgtttccgagccgcgcaagaagccaaagtcaaggaagaagagaaacaagccttaatt
gaagaatataaacaacaaggcaaggaactcccagaagactataaaactgataagaaagct
tgggattcgaacgcaattactccgggtacgccattcatgacccttttaacggaaagtttg
cgatattggatcgtctacaaaatgaataccgacaaaggctggagtcaaattcaagtaatc
ctatccgacgcatcagttcctggagaaggggagcacaagattatggatttcgtacgtcga
cagcgaactcagccttcttatgatcccaacacgaaacatgtaatctacggactggatgca
gatcttataatgttatccttagcaacacatgaacctcatttcaaagttttacgagaagat
gtattcgcagaccagaagaaagggaaaggttgttacacttgtggacaacttggtcatcac
agtagtcaatgtcaaggcaaaccgaaagagaaagtagatgaacatgataccaagcaaaag
ccagttgaaagaaagccattcatatttctagacgtcggaatcttacgagaatatttggcg
attgaattgaatatcggtggattaccgtttccatttgatattgaacgcgcgatcgacgat
tgggtgttgctgattttcttcgtcggaaatgactttctaccgcatctaccaagtctcgag
attcgagaaggtgcgatcgacactctactcaagatatggaaaaccaatctaggacgaatg
ggcggattcctgaccgactgtggagccttgaatttgaaacgcaccgaaatcatcttagaa
ggactggcctcacgtgaagacgagatcttccgtagacgtagagaagcagaggaaaggcaa
gatcaatctgctaaaagacgtaaaattgatgatgacaacaagcaagttcatatcaaatca
tccacaaccaatcagcctctgcctacttccaatctaggcaacctctcaacaaccctcaac
gtgcccctaaaaccgaccttcttgcctgaagatgtcagacaaacaacacagtccgctatt
ccggggctcggtaatgctagcttatccatgatgagtaatgcggatgtggttaaaaaccgg
ttcgcgatcaggacggctaacatggatgcagctgcgatgctgaaagcagagctgagtgga
acattagaacttccgacgtccgcgcccgccggtgatgatgccactaaaatgaccatggag
tcgactgacgtggcgctagccgagtctcaagtccccctcgaagccaataccgagacgcct
ggcgtgacacaggccgagtctgatgctcccaccggaacgcagaatccatcaaatgaaagc
cactcggcgatagatacctcgcaaggcaagccatccaatgctgaaaatgacgagtcggcg
gccacaacaaacggaaaggattcttgccaagattctgcagccggccctcctgatggggaa
actgaatcgactgtaaaaccacccacaccagttcaaaagcgtaaagctgatgagcttgaa
tctgctgacccagcaatcggccctatagatgattccgtcgtactatcggaagatgaagat
gaggatgaagcccccggtgatgtgtccgttttcgttcctggtgagcccagtcgaccagcc
cccttgaagatgctcggtaataatatggtcgagcaagatgatacagtcaaattatgggaa
ccgggttaccgcgaacgatactttagacaaaagtttggaatagagttaaacgatgaagtt
gaaaaacgaaaaatagtcaagcattatgtcgaaggcctagcatgggttctggcttactac
taccagggatgtcaatcgtggcaatggttttatccctaccattactctccatttgcttcg
gattttacaaatttggaagagtttgaaatcaagttcaaccttggacagccattcaagcca
tacgagcaactgatgggtgttttcccagctgcttcaagatgtcatattcccgacgtttac
cacgacctgatgatgaatgatgactcgcctattaaagacttttatcctgaggaattcgaa
attgacatgaatggaaagaaaatgctgtggcaaggggtcgccttgctaccattcatcgag
caagatcgattgttgaacagtatgaaggactgcgaagatcgcttggcacctgaagataaa
attaggaacgaacctgggcatgtggtcatgttttgtggtgaagctcatcctcaatatgag
aacttttgtaaaatataccaaaaacgagataacaaggaggccgtgacactggatcctgcg
cacgcaaacggagtcttcggctcagcattacccgacccagactgcattccgggctcgacg
ttctattcgccactgccgacggttgggctgcccgatatctcgaatgacaaatcgatattt
gctcgattttttgttccatcacaactagtcccccatcgcagcctactactaagtggggtc
gctttggaacggcccatcctaaataatcatgatcgagacctaacgcgtcggggtggaaat
caagcgcatgggggtaaccaacactacggcagcgatggctttcatcaacagcggagagac
ttcggggacgggccgggaatcatgactcattatcacaccaataattctaacttcaatggc
ggcggtggcggctattggaactccaaccgaggatctggtaatcattcccagtaccaacaa
cctcatcactcaacgcacgcacatgactacaggaactcggggccaccggctggcaaccat
cggggctactccaacgggcctgcccatcatcatcacaatggctatccgcaaggaggtcat
cattcgcagagggcaccatacggattgcctacaagttttggatcgaccaatgcgagaggt
gggggcggctatcgacctcctcacagcgcgcctcagtcgagctactataacgcacccatg
aaccataataatggcggttatgtccccccggtcaggtacggtgggacaggggttggactc
cctcaacgcgccccaccggccccttttgcagacccgtatcctcctccaactcaatcatct
acacactattctcgagccgggtatcggccgccgggcatcacccccgccttcactcgaact
gtgcccaattaccctccccgggccgcccaacaaccctcccgacccccttatgatcactca
tctggtaggtag

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