Puccinia graminis: PGTG_05974
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Entry
PGTG_05974 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
pgr
Puccinia graminis
Pathway
pgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PGTG_05974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgr03019
]
PGTG_05974
Messenger RNA biogenesis [BR:
pgr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
PGTG_05974
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
Motif
Other DBs
NCBI-GeneID:
10532851
NCBI-ProteinID:
XP_003324072
UniProt:
E3K682
LinkDB
All DBs
AA seq
980 aa
AA seq
DB search
MADEPTESTTNLVATPDPAPTTQEPEPANEIPETSDSPQIANPLELPLPEKPPAEQNAPL
FAPSPTASENNQGNDLPTLSPTIIENKQEADDPTPLSPTASENRQTSDPSSTASENKMNN
DPSPATSENKQTNDPSPSTSENKQTNNDPSPTPTSENKQTNNDPSPPLTQPVLSRLASLR
QRVEKDPMDGEAWIELIADAEKKGDLEKTREVYSSFLQHFPDAANQWIAYADLELGHGHF
PEVEQIFSRCLRSSVSVELWAFYLNYIRRVNPVEGDKAAASRAIIISAYDFSLNHIGIDR
ESGQIWLDYINIVKAGEAAGTWQEQQKMDSLRKLYQRAVCIPLDNIEQIWKEYDGFEHQM
SKMTAKKFLADKSAQYMTARGALKEMKSLTDPLLRPRVPAKPNWKRISDHKQLDQWKTYL
AWEEKNPLEIADKNLLNTRIQYAYRQAIMHMRFYPEIWYLAASHLQKNDKAEEALAVLQA
GLTANPTSIVLTYAIVEAHENLKNYPACYAAFNSLIEYYHSEIDEINKTIEKEIAHGIPI
IESKTANPTTLPDGEADQELTEEEKQRAKEEEQLRTNITALYKPKIDEFREAAASVWITE
MRFARRTEGIKPARAVFTRARKAPYITSHVFEASAMMEYHWNKEPAVATKVFDLGLKTFS
EDVNYVLQYLHFLITLNDDSNARALFEKTVSKIPPESARPLWRRWAAYEFIYGDKAASEK
LNSRVAEIFPDWGVVERLSDRHAYADLGDVLGRELGTAIEPIPLRNRSPSPAPGHQEGFG
FKRGGAGGHEAGHHPGGIPSGPASYRNRQQQHHLRDRSFSPDFRPKRPRGQRSSLSPERR
NGPASLPPSVIDGPSNPPSKRGRENYENNPKRNRFSSPPSRSRESPPPPNPYAWFPEGLR
YFLGILPLATSFEGPRLDTNTVLQVLSEATIPVSPSAPKNNSGGTPHGPSNVSGWGPNRG
GGNGTSGRGNHNATRRGRRK
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgaacctactgaatcgaccacgaacctggtcgccacaccagatccagcacca
actactcaagagcctgagcccgcaaatgagatccctgaaaccagcgactcacctcagata
gccaatcctctcgagcttccgctaccagaaaaaccaccagccgagcagaacgcgccctta
tttgcaccatcccctaccgcctccgagaataaccagggcaatgatctaccaacattatcg
cccactatcatcgaaaacaagcaggaggccgatgatccaaccccactatcacctactgca
tccgaaaacaggcagaccagtgatccatcgtccactgcctccgaaaacaagatgaacaat
gatccatcacctgctacctctgaaaacaagcagaccaatgatccatcaccttctacctcc
gaaaacaagcagaccaataatgacccatcacccactcctacctcagaaaacaagcagacc
aataatgatccatctccgcccttaactcaaccggttctctctagactggctagtcttcgt
cagagggtggaaaaagatccaatggatggtgaggcttggattgagttaattgccgatgca
gagaaaaagggggatctcgagaagacccgtgaagtgtactcatccttcctccaacatttc
cccgatgctgccaatcaatggatagcatatgcagatctagagctaggacatggccatttc
cctgaagttgaacagatcttttcccgctgtctacgatcctcggtctcagtcgaactatgg
gcattctacttgaattatatccggagagtcaatccagtcgagggggataaggccgccgcc
tcacgtgccatcattatttctgcctacgatttcagtctcaatcatatcgggattgatcgt
gagtctgggcagatctggctggactacatcaatattgtgaaagccggtgaggccgctggt
acttggcaagaacaacaaaagatggactcgttacgtaaactttaccaacgcgccgtttgt
attcccctggataacatcgaacagatttggaaagagtatgatggctttgaacatcaaatg
agcaaaatgactgccaagaaatttctggctgacaaatcggcacagtatatgacggcgcgt
ggggcactaaaggaaatgaagagcctgacagatcccttactgcgcccgagagtgcctgcc
aaaccgaattggaaacgaatcagtgatcataaacagctcgatcagtggaagacctatctt
gcttgggaggagaagaacccgctggaaatagcggataaaaaccttctcaacactcggatt
cagtacgcctatcgacaggctatcatgcacatgcgtttctatcccgaaatctggtatctt
gcagctagtcacttgcaaaagaacgacaaggccgaagaagccctggcggttctacaggct
ggattgacagcaaatcccacaagcattgtgttgacgtacgcaatcgtggaggcacatgaa
aatttgaaaaactatcccgcatgttatgcggcattcaattcactgatcgaatactatcat
tcggagatagacgagatcaacaagaccatcgaaaaggaaatcgcacatgggattccgatc
atcgagtccaagactgccaatccaacgactttgcccgatggagaagctgatcaagagctg
accgaagaagaaaagcaacgtgctaaggaggaagagcaacttcggacaaacataaccgcg
ctctataaacctaagattgacgagtttcgtgaagcggccgcaagtgtttggatcacggag
atgcgctttgcacggcgaaccgagggaattaaaccagctcgagcggttttcactcgggca
cgtaaagcgccctatatcaccagccatgtctttgaggcctcagctatgatggaatatcac
tggaacaaggagcctgctgtggccaccaaggtcttcgatctcggcctcaagacgttcagc
gaggacgttaactatgtgcttcaataccttcactttttgatcaccttgaatgatgatagc
aacgcccgcgctctatttgagaaaaccgtttcgaagattcctcctgaatctgctcgtccc
ctgtggcgtagatgggccgcttatgaattcatctatggtgacaaggctgcgagtgaaaag
ctgaattcccgagtggctgagatctttccagactggggcgtcgtggagcgtttgtcagac
aggcatgcctacgctgatttgggggacgtcttgggacgagagttaggaacggcgatcgag
ccgatccctctccggaatcgatcgccctcaccagctccaggacatcaggaagggtttggg
ttcaaacggggcggtgcaggagggcacgaggcggggcatcatccaggggggattccatcg
ggtccagcctcgtaccgaaaccggcagcaacagcaccatctacgcgaccggagtttttcg
ccggacttccgacccaaacggccccgtggccaacgctcgtcgctctcacccgagcgtcgt
aacggtcccgcttccctccctccctctgtcatcgatggcccctctaaccctcctagtaaa
cgtggacgcgagaattacgaaaataatccgaagcgcaaccgcttttccagtcctccctcg
aggagtagagaaagcccgccaccaccgaatccttatgcgtggttcccagaaggcttgcgc
tacttccttggtatcttgcctctagccacaagctttgaagggcctcgactagataccaat
actgttctccaagtcctcagcgaagcgacgatcccagtcagtccaagtgcgccgaagaat
aactccgggggaaccccacacggaccaagcaatgtgtccggttggggccctaatcgtggc
ggtggtaatggcacttccggcagaggaaatcacaatgctacccgccgcggaagacggaaa
taa
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integrated database retrieval system
