Puccinia graminis: PGTG_06293
Help
Entry
PGTG_06293 CDS
T02226
Name
(RefSeq) DNA-directed RNA polymerase I subunit A1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pgr
Puccinia graminis
Pathway
pgr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PGTG_06293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgr03021
]
PGTG_06293
Enzymes [BR:
pgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PGTG_06293
Transcription machinery [BR:
pgr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
PGTG_06293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
YhfH
zf-FPG_IleRS
Motif
Other DBs
NCBI-GeneID:
10539345
NCBI-ProteinID:
XP_003324756
UniProt:
E3K7N9
LinkDB
All DBs
AA seq
1887 aa
AA seq
DB search
MQAKILCDQDSCPENKTLVPILAARDLDSDTFPHGQSFERVIKIPSNLELYQAATPHPAI
YFPPSNSSSITNNQLPGQAMDPAHPLLTNITSVSFSPLLSSDVRSISVLQITNPSLLDNN
NVPSTAGLYDPRLGPLDWQDICWTCHQLNTQCPGHFGHIELNVPVFHPLFMTHAYQLLRS
TCFYCHHFLCSQLVILRYTAKLKLLEHGLPIESDAIDDFPTSQPITPGKRAAEEGADQEN
EDPEADQAEFDLNFYKTSISKFVAECLDRKKSSIKARCSGEDYKIGMCFDRRRQVISELF
KLLPKKKCERCGAHSSRMRKDGHTKIMEYSLVPKQEQYHKLTGKVRPNVLKFSAGSTLSR
RSSSIQPSATNKRQRTDPSSENGRYFSDVNSDDGASAWAQSTQAARSNLGDAASDSDVDE
VVQHKKAASSRAETESAESSNDDDDDDDDDNNNDGQEQGKGAKPSKQTERMMLAQEARAH
LNQLFINEPEICGLLYGSRFPALQSHREQAPASADMFFLEVVPVPPSRFRPAAIMGGMTL
ESPQNQLLTQILTQTIKLRDLNSDLATTSKRIKVEKDLDSSEVEALQTTRAKLYRQVLEA
CVGMQVAVNSLMDSTKNPTNMGPGKLPPQGIKQLLEKKDGLFRMNMMGKRVNYAARSVIS
PDINIETNEIGVPPVFAKKLTFPEFVTAHNYEQMHRLVCNGPNKHPGAVYIQDEDGTMIS
LDKMDEEGRRALANTLLHSNGDAENANSMARPDIGLPSTRTRMRSKRVHRHLDDGDILIL
NRQPTLHKPSMMCHRARILKGEKTIRMHYANCNSYNADFDGDEMNMHFPQSLVAQSEARM
IANNDNQYLVPTSGNPLRGLIQDHVVSGVWMTNKDTFFTRDDYYQIIYGALRPEGNYSGQ
GRVVTVPPTIWKPVPMWTGKQLISTIMKNITPLNASGLNLFSSSKVRGKSWGTQHTGEEH
VTFMDGDLIQGVIDKSQIGASPYGLVHSVYDLYGADIAGKLLGILSRLFTKFLQHRAFTC
RMDDLQLTKRGDEMRSKLISETSQRGIRATLSTIGLSEKEAKTPHGMIDLENRLQEVLRD
DMKMAALDNAYSGENSSLQTAINNQCLPSGLAKPFPWNNMQMMTSSGAKGTPVNASQISC
LLGQQALEGRRVPVMVSGKTLPSFRAFETAPRAGGFVAQRFLTGIRPQEYYFHCMAGREG
LIDTAVKTSRSGYLQRCLIKHLEGVRVHYDHTVRNSDSSILQFHYGDDSLDVTKQKHLNQ
FDFSLMNRSSLITRFNPSRIAGQVDCTTANDHTDRIVKAIKKGVRSLPPPTLSLFSPSRH
FGSISEKFAVDVEAYKNLNPLQVLKSKKSIRKTWPVYRKSDDLVSMDIFSSLMHVRFMMG
LVDPGEAVGLLAAQGVGEPSTQMTLNTFHFAGHGAANVTLGIPRLREIVMTASANIKTPT
MKFPIRPEVTDEQFERFIKQTARLYLSQVVDQVLVTERLKRNGNNAQISKVYEIRLQLYP
AEEYCREYSINVPAVFKSIAKVFVPMLERMITRELKTLQSDLKIQLAEIGKGKSSSSRKG
PGNGANGSEDGEEDVPARRVDEADIEDGDAYDEKRARQRGELDYDKDGVESDSDAESEVM
NDEKLRKMTGASKTREDRDSDDDSSSSSADSDDARSLEELEISQSDAEELADEVQQLSHY
VNSIEFDRHGGYCQLSMQFPSSSTKLLLVGLIEESCRRAVIQEIKGIARTLVSQSDDKNK
ERRFGMTEGANLIAAWDFGHNIIELDELYSNDINAMLKTYGVEAARSSIIKEISGVFNVY
GISVDYRHLTVIADYMTSEGRYKPFNRSGLSNNVSPFLKASYETTATILTDATIFGDFDN
LLNPSASIVLGQPPMTGTNSFDVLVKT
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcaaaaattctgtgtgatcaagatagttgcccagaaaacaaaacactggtcccc
atattggccgcaagagacttggatagtgacaccttccctcatgggcagagctttgagcga
gtgataaagatcccatcaaatttagaattataccaagcagccactcctcacccagcaatc
tactttccgccaagcaacagctcatcaatcaccaacaatcaactcccaggccaagctatg
gatccagcccatcctctcctcaccaacatcacctcagtctcattctcaccgctcttatca
tcagacgtccgatcaatctcagtccttcaaatcaccaatccatccctactcgataacaac
aatgtgccctcaactgcaggcctctacgaccctaggcttgggcccctcgattggcaagat
atctgctggacctgccatcaactcaacactcaatgtcccggtcatttcggtcacatcgaa
ctcaacgtgcccgtctttcatccactcttcatgacacatgcctatcagctcttgaggtca
acttgcttctattgccatcatttcctgtgttctcagttggtgattctccgatatactgca
aaactcaaacttctagagcatggcctgccaatcgaatcggatgcaatagacgattttcca
acctcacaacccattacccctgggaaaagggccgcagaggaaggcgccgatcaggaaaat
gaagacccagaagcagaccaagccgaattcgatctcaacttttacaaaacctcaatctca
aaatttgtggccgaatgtttagatcggaagaagagttctatcaaggccagatgctccggg
gaagattataagattggaatgtgcttcgatcgaaggcgacaggtgatttcggaactgttc
aaattattacccaagaagaagtgcgaaagatgtggagcccactcgtcgcgaatgaggaaa
gacggtcatacgaaaattatggaatactctctcgtgcctaaacaagaacagtatcacaaa
ttgacgggcaaagttaggccaaacgtgctcaaattctccgctggatcaacccttagtcgg
cgctcatcttccatccaaccatcagccacaaacaaacgacagcgcacagacccttcgtcc
gaaaacggcagatactttagcgatgttaatagtgacgacggtgcttcggcctgggcccaa
agcacccaagctgcaagatcaaacttaggtgacgcggcttctgatagcgatgtggatgaa
gttgttcaacataaaaaagctgcaagcagccgcgcagaaactgaaagtgctgaaagctcg
aacgacgacgacgacgacgacgatgatgataacaacaacgatggccaggagcaaggaaaa
ggcgccaagccatccaagcagaccgaacgaatgatgctcgctcaagaggctcgggcccat
ctgaatcagcttttcattaatgaaccagaaatttgcggattgttgtacggctcacgtttt
ccggcattacaatcgcatcgtgaacaagcgccggcttcggccgacatgttttttcttgaa
gtcgtgcctgtgccgccttcaaggttccgtccggctgctatcatgggtggtatgacactt
gaatcacctcaaaaccaactattgacccaaattctcacccaaaccatcaagctccgcgat
ctcaatagcgatctcgcgactacaagcaagaggatcaaggtagaaaaagatttggattcc
tctgaagttgaagccctccaaaccactcgggccaaattgtatcgacaagttttagaagcc
tgtgttggtatgcaagtcgcggtcaacagtttgatggatagtaccaagaacccaacgaac
atgggcccaggtaaactaccaccccaaggtatcaaacagctgcttgaaaaaaaggacgga
ctgtttcgtatgaacatgatgggtaaacgagtgaactacgccgcgagatcagtcatctca
cccgacatcaacatcgaaaccaatgagatcggagtaccaccggtctttgctaagaaactg
acgtttcccgagtttgtcaccgcacacaactatgagcagatgcaccggttagtttgcaat
ggtccgaataagcatcccggggcggtttatattcaagatgaagatgggacgatgatttct
ctagacaaaatggacgaggaaggccgacgagcgttagccaacactttgctacactcaaat
ggtgacgccgagaatgcgaatagtatggcaaggcctgatatagggctaccatcaacccgg
acacgaatgcgtagtaagcgcgtccatcgccacttggacgacggcgatattcttatctta
aatcgacagccaacacttcacaaacctagtatgatgtgtcaccgagccaggattttgaaa
ggcgaaaagacgattcggatgcattacgcaaactgcaattcttacaacgctgattttgat
ggagatgagatgaatatgcatttcccacaaagcttggttgcccaaagcgaggcacgaatg
atcgcaaacaacgacaatcaatacttagtaccaacctcggggaatcctctccgtggcttg
attcaagatcatgtggtatctggagtttggatgacgaataaagacacgtttttcactcga
gatgactattatcaaatcatctatggagctctgagaccagaaggaaactactctggtcaa
ggtagggtcgtcaccgtgcccccaacgatctggaaaccggtacctatgtggaccggtaaa
cagctgatctcaactatcatgaagaatatcaccccacttaatgcatctggacttaactta
ttctcatcctcaaaggtccgaggaaaatcgtgggggactcaacatacaggagaagagcat
gtgacctttatggatggcgacttgatccaaggagtgattgataaatcacagatcggtgct
tccccatacggtctggtacattccgtttatgacttgtacggtgcggatatcgctggaaaa
ctgttgggcatcctcagtcgattattcaccaaatttctccaacatcgcgcattcacttgc
agaatggatgatctacagctcacaaaacggggggatgagatgcgttcgaagctcatttcc
gaaacttctcagcggggtatccgggctactttgtcgaccatcgggctctcagaaaaggaa
gcgaaaactcctcacggtatgattgatttggaaaaccgtcttcaagaggtcttgagagat
gatatgaaaatggcagcacttgataacgcctacagcggagagaactcctcgctacaaaca
gccatcaataatcaatgccttccttctggtctagcaaaaccattcccatggaataatatg
caaatgatgacttcatccggtgcaaagggcactccagtcaatgcatctcaaatctcttgt
ctactcggtcaacaagccctggaaggacgtcgggtacccgtcatggttagtgggaagaca
cttccatcctttcgcgcgtttgaaactgcaccacgggcgggtggatttgtcgcccaacgt
ttcttgactggtattcgtccgcaagagtattactttcattgcatggctggacgagagggt
ttgatcgacacggctgtcaaaacgagtcgatcaggatatttacaacgttgtctaatcaag
catcttgaaggagtgcgagttcattacgaccataccgtccggaacagcgattcatcgata
cttcagttccattatggagatgattcacttgatgtgacaaaacagaagcatctcaatcaa
ttcgacttttcgctcatgaatcgtagttctttgatcacacgcttcaacccaagtcgaatc
gctggtcaagtcgattgtaccactgctaacgaccacaccgatcgaatagtcaaggcgata
aagaaaggagtccgttcactgccgccacccacgctgtctctcttcagtccaagtcgacac
tttggaagtatttcggaaaaatttgccgtagatgtggaagcctataaaaatttgaatccg
cttcaagtcctaaaatctaagaaaagtatccgaaagacgtggcctgtgtaccgaaaatct
gacgacctcgtatcaatggatatcttcagctcattgatgcacgttcggttcatgatggga
ctcgtcgacccaggagaagccgttggcttgttggccgcgcaaggagtcggagaaccttca
actcaaatgacgctcaataccttccatttcgccggtcacggcgccgcgaacgtcacctta
ggtatcccgcgtttgcgtgagatcgtgatgacagcgtccgcgaacatcaagactcctacg
atgaaatttccgatacgaccggaggtgacggatgagcaattcgaacgatttatcaagcaa
acagcccgactgtatctatctcaggtggtcgatcaagtattggtgacagagcgattgaaa
cgaaatgggaacaatgcacaaatctccaaagtttacgaaatcagattgcaactctatccg
gctgaagagtattgtcgcgagtacagtatcaacgttcccgcagttttcaagtcgattgcc
aaggtgtttgtaccgatgctagagcgaatgatcacgcgtgaattgaagacgctgcagtca
gatctgaaaattcagcttgctgagatagggaaaggcaagtcgagttcgtcgcgaaaaggc
ccaggcaacggtgcaaatggtagtgaggatggtgaagaggatgtccctgctcgaagagta
gatgaagctgatattgaggatggagatgcctatgatgagaaacgggcgcgtcaacgggga
gaacttgactacgataaggatggcgtcgagtcggattcagatgcggaatcggaagtcatg
aatgatgaaaaactgcgaaagatgaccggtgctagtaaaactcgtgaagatcgagatagt
gatgatgactcgtcatcaagctcggccgattcggatgatgctcgaagtcttgaagaactc
gaaatttctcagagtgacgccgaagaacttgcagatgaagtgcaacagttatcccactat
gtcaactcgatcgagtttgatagacatggcggttattgccagctatcaatgcagtttcca
tcgagttcaaccaaactgttattagtcggactgattgaagagagttgtagacgagcggtg
atccaagaaatcaaagggatcgccaggactttagtttctcaatcggatgataagaataag
gagaggaggtttggaatgaccgaaggcgccaacttgatcgctgcttgggacttcggccac
aatatcatcgagttggatgaattatattccaatgatatcaatgcaatgcttaaaacttat
ggcgtcgaggcggctagatcttcaatcatcaaagaaatctctggcgtctttaacgtgtat
ggtatctcagtggattatcgacatttaacggttatcgccgactacatgacttctgaagga
aggtataaaccattcaacagatcgggcctgtccaataacgtttctccattcctgaaagct
tcatatgaaaccacggccactattttgaccgatgctacgatctttggggacttcgataac
ctcctcaatccgtcagcttctatcgtcttgggccaacctcctatgaccggcactaattcc
ttcgatgtcctcgtcaaaacttga
DBGET
integrated database retrieval system
