Puccinia graminis: PGTG_06673
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Entry
PGTG_06673 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pgr
Puccinia graminis
Pathway
pgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PGTG_06673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgr03019
]
PGTG_06673
03041 Spliceosome [BR:
pgr03041
]
PGTG_06673
Messenger RNA biogenesis [BR:
pgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
PGTG_06673
Spliceosome [BR:
pgr03041
]
Complex B
Other components
Prp19-related factors
PGTG_06673
Complex C
PGTG_06673
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
NRDE-2
PBP1_TM
Tma16
Motif
Other DBs
NCBI-GeneID:
10539736
NCBI-ProteinID:
XP_003325136
UniProt:
E3K899
LinkDB
All DBs
AA seq
1074 aa
AA seq
DB search
MEELRSLFPITSDLKKLLQTTQLTLSNQPEHLLIEQDLLTNPNNQSLWNSYIHRLTEELE
REIKEQRGKATQIENQLLGNKLETETGRRAYQILVSVYERALIYFPKSFKLWKDYLQLRQ
AFILGQPKKKFNPSSNKKKQPNDRSLTVLDHISKSDDQLEDNERDMDGGGGWSGHLDGGL
GWLEWKALASAHERSLTWLPQMPRLWLSYLTLLTHPSCPAPLSLTHTRHTFDRALRTLPH
TLHERIWKPYLRWSEQIAGGETCIRVWRRYLAIDPSLTAHYVKFLVGEAEASTVHRDDDD
HQDDEEEDEEEEDDEDDKGQERAGKASHPSKALVAAKLLLGLVRKARRGKYKSPDGKSPY
QLLLDFIELCDKFPSQVGISLKETLRRRQKPSSQHPNTTIDHQDSIKDATSGETPAPFNG
LIRIAGAPVPLHPSSTRDKISQEAEAYDPDTDPANPSKLDIEQIVEMEGLSVYKDQIGLI
FTNLATYWIKRAEFDRAKETFEAGIARVMTIRDFTTIFDAYAEFSEQYISTLMDSLGENS
EGEDGEGGKSSEELELDQKMKEFEELMDRRPFLVNDVLLRRNPNDVQEWEKRVVLYGEDQ
DEKVVETYLKAIETINPKKATSNFNQLFIHFAKWYEENGVDPSDDSLPDLDSARKVFERA
INVNFQRVDDLAEIWIEWAEMEVRNEKYTEALRVIRRATTVPPNHKKKAISFHDESLAVQ
VRLFKSLKLWSFRVDLEESIGTVESTQKAYDTIFELKIANAQIVVNYGNFLEENEYWEES
FKVYERGIELFTYPIVFEIWNTYLNKFMKRYQGTKIERARDLFEQALENCPEKFVKPIFL
SYAQLEESFGLAKRAMGVLERATEKVALDDRFEMFAYYIAKATENFGLPATRPIYEKAIK
SLPNNQTAEMCLRFANLEQKLGEIDRARAIYAHSSQFCDPRTSPKFWETYHNFEIQHGSE
DTFREMLRIKRAVQASFNTETSYLAAKAAAARAAGNRGGEATVSQQQDEDDETGSGDPMR
RLEKDDSTTAGNQAFVLSKDRQAQLDRSGPLNPDQQATNTSANVDEIAIDDDDD
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacttcgatcactctttccaatcaccagtgacctcaagaaactactgcaaaca
acccaactcacactctcaaaccaaccagaacatctactgatcgaacaggacttactcact
aacccaaacaaccagtcactatggaactcatacatccacagactcaccgaagaactagaa
cgagagatcaaagaacagagaggcaaagcaactcagatcgaaaaccaactactcggtaac
aaactagagaccgagaccggaaggagggcctaccagatcctagtctcagtctacgaacga
gcactgatctacttccccaaatcattcaaactatggaaggactacctgcaactcagacaa
gccttcatccttggacagcccaagaagaagttcaacccatcctcaaacaagaagaaacaa
cccaacgatcgatccctaaccgtactcgatcacatctccaaatcagacgaccaactagag
gataacgaacgcgatatggatggcggtggtggttggtccggccatctggatggaggacta
ggatggctggaatggaaagcactcgccagtgcacacgagagatcactcacctggcttcca
cagatgcccagattatggctatcatacctcaccctactcactcatccatcctgtcccgcc
ccactctcactcactcacactcgacacaccttcgatcgcgcactacgcacccttcctcac
accttgcacgaacgaatctggaagccctatctgcgatggtccgagcaaatcgccggtggt
gaaacttgtatccgcgtctggagacgctatctcgccatcgatcccagcctcaccgcccac
tacgtcaaattcttggtcggcgaggcggaggccagtacggtccatcgcgacgacgatgac
catcaagatgacgaggaggaagacgaagaggaagaagatgacgaggatgataagggtcag
gagagggcgggaaaagcatcgcatccttctaaggctctcgtcgccgcgaaattgctctta
ggactggtcaggaaggctcgccggggcaagtacaaatcaccagacgggaagagcccctac
caactcctactagacttcatcgagctctgcgacaagttcccgagtcaggttgggatcagc
ctcaaggagaccctcagacgtcggcagaaaccatcatcacagcatcccaacacgaccatc
gaccatcaggattcgattaaggatgccacatctggcgagactcccgcaccctttaacggc
ttgatcaggattgcgggagcaccagtcccgcttcacccttcttcaactcgagataagata
tcacaggaggcagaagcctacgatccagataccgatccagcgaacccatccaagctggac
atcgaacagattgtcgaaatggaaggtcttagtgtctataaggatcagatcgggctgatc
ttcactaatctggcgacctattggatcaaacgagccgaattcgatagagccaaggagacc
ttcgaggctgggattgccagggtgatgacgattcgagacttcacgacgatcttcgatgct
tatgcggagttctcagaacaatacatctcgaccttgatggactctcttggagaaaattcg
gagggagaggatggggagggagggaagagctcagaagagctcgagttggaccaaaaaatg
aaagagtttgaggagctgatggatcggagaccgttcctggtcaacgatgtgcttctgaga
agaaacccgaacgatgtccaggaatgggagaaacgggtggtgttgtatggcgaagaccag
gacgagaaggtggtggagacttatctcaaggcgatcgagacgatcaaccccaagaaggct
acctcgaacttcaaccaactcttcatccatttcgccaaatggtacgaggagaacggggtc
gacccatccgatgattctctgcccgacctcgatagcgcgcggaaagtgttcgaaagggcg
atcaatgttaacttccaacgggtcgatgatttggcggagatatggatcgaatgggcggaa
atggaagtacgaaatgagaagtatacagaagcgttgagggtgatcagaagggcgacgacg
gtgcctccgaatcataagaagaaggcgatcagcttccatgatgagtctttggccgtccaa
gttcggttgttcaagtctctcaagctttggtcttttcgcgtcgatctggaagagtctatc
gggacggtcgagtcgactcagaaagcttatgatactatcttcgagctgaagatcgccaat
gctcagatcgtagtgaattatggaaatttcttggaagagaatgagtattgggaagagtca
ttcaaagtatacgaacgcgggatcgagctatttacgtatccgatcgtgtttgagatctgg
aacacgtatctgaacaagttcatgaagcgctaccaggggacgaagattgagcgggcgcgg
gatctgttcgaacaagcgttggaaaactgtccggagaagttcgtcaagccgatcttcctc
tcgtatgctcaactggaagagtctttcgggctcgccaaacgggccatgggcgtgcttgaa
cgagctactgagaaagtggcgctagatgaccgcttcgaaatgtttgcttattatatcgct
aaagctaccgaaaacttcggactacctgcgactcgtccgatctatgaaaaagcaatcaaa
tcgttgcccaataatcagaccgccgaaatgtgtctaaggttcgctaatctcgagcaaaag
ttgggcgagatcgatcgggctagagctatttatgcccattcttctcagttttgcgatccc
agaacttcgcctaagttttgggaaacttaccataattttgagattcaacatggaagtgaa
gacacatttagagagatgttaaggattaaacgagccgttcaagcttcattcaacaccgag
acatcctatctggcagccaaagcagcagccgcaagagccgctggtaatcggggtggtgag
gccactgtctctcaacaacaagatgaagatgatgaaacaggatcaggagacccgatgcgt
agactcgaaaaagatgactctactactgctggcaatcaagcttttgtcttgtcgaaagat
aggcaggctcaactcgatcgttctgggccccttaaccccgatcaacaagctaccaatact
tccgctaatgttgatgagattgcgatcgatgatgatgatgattaa
DBGET
integrated database retrieval system
