Puccinia graminis: PGTG_07785
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Entry
PGTG_07785 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pgr
Puccinia graminis
Pathway
pgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PGTG_07785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgr03021
]
PGTG_07785
03019 Messenger RNA biogenesis [BR:
pgr03019
]
PGTG_07785
Transcription machinery [BR:
pgr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
PGTG_07785
Messenger RNA biogenesis [BR:
pgr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
PGTG_07785
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-CCCH_4
zf-CCHC
Torus
zf-CCHC_2
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
10532916
NCBI-ProteinID:
XP_003325955
UniProt:
E3KBS3
LinkDB
All DBs
AA seq
425 aa
AA seq
DB search
MAIPPLPKPSAAAAAGSSNNSLPISTTIVLRPDLRHVELEIEKHLKEELGLKLDTDQQLC
PQHLLHLSSINQPSSGENQQPPCQLGNQCPFRHATPSSLNFTTPPVGSAANRNHHHHHHS
SHSKTVCKHWLRGLCKKGNSCEFLHEYNLRTMPECWFFGKYGFCSNGDECMYLHVDERMR
VLECMDFRRGFCPKGPDCPQKHIRRPICRLYMAGFCPYEKTCHIGGHPKFEVDPTPRGNP
YINSFNPFDRPRGDPDRPMLNNYSGQSNPKPPMGIHKHHQQQQQQQQQQIQNQHHHPQQP
QFLPQHPNQQANPALNPHLIQHQINLKANSILNHPINPLLNPSSNPPTNPNHHPHEVLPN
DEHWVQTDSGPRKKRNLDEVTCFKCGQRGHYANTCPNPMVPGNRGGVVRGPGGRLLGDDD
LLPVL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggccatcccaccactaccaaaaccatcagcagcagcagcagcaggctcgtctaataat
agtctcccgatcagcacgaccatcgtactcaggccagatctaagacatgtcgaactggag
atcgagaaacatctcaaggaggaactcggcctcaaactggataccgaccaacaactctgt
ccacagcatctcctccatctctcctcgatcaaccagccatcctcaggcgagaaccagcag
ccaccctgccaactaggaaaccaatgtccattccgccatgccaccccttccagcctcaac
ttcaccacccctcctgtcggctcagccgcgaaccggaaccaccaccatcaccaccactcc
tcccactctaagacggtctgcaaacattggttacgtggtctatgcaaaaaggggaactca
tgtgaattcctgcacgagtacaacctccggactatgcctgaatgttggttctttggcaaa
tatggattctgcagtaatggtgatgaatgtatgtatctacatgtcgatgaacggatgaga
gtgctcgaatgtatggacttccgtagagggttctgtcccaaagggcccgactgtccacaa
aaacacatcagaagaccgatctgccgattatacatggctgggttctgtccctacgaaaag
acctgccacatcggggggcacccgaagtttgaggtggacccaactccccgggggaacccg
tacatcaactccttcaacccattcgatcgtccacggggagaccccgatcggccgatgctc
aacaactacagcgggcaatcgaacccgaaacccccgatgggaatccacaaacaccaccaa
cagcaacaacagcagcagcagcagcagatccagaatcaacaccaccatcctcaacaacca
cagttcctaccacagcatcctaatcaacaggctaaccctgccttgaacccccacctgatc
caacaccaaatcaacctcaaagccaatagtatcctcaatcacccaatcaacccactcctc
aacccctcctccaaccctccaactaatcccaatcaccatcctcacgaagtccttccgaat
gacgagcattgggtccagactgattcggggccacggaagaagaggaacttggatgaagtc
acttgtttcaaatgcggccaaagaggccactacgcaaacacctgtcctaatcccatggtc
cctggtaatagaggcggagtggtcagaggacccggtggtcgtcttctaggcgatgacgat
cttttacctgtgctatag
DBGET
integrated database retrieval system
